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转录因子Ttk69与成体果蝇肠道上皮终末分化细胞命运的维持

批准号:
32100595
项目类别:
青年科学基金项目(C类)
资助金额:
30.0 万元
负责人:
郭兴庭
依托单位:
学科分类:
细胞命运及重编程
结题年份:
2024
批准年份:
2021
项目状态:
已结题
项目参与者:
郭兴庭

项目摘要

结项摘要

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中文摘要
成体组织的稳态不仅需要成体干细胞的有序增殖与分化,也有赖于终末分化细胞命运与功能的稳定维持。目前的研究多集中于调控干细胞增殖与分化过程中子细胞命运决定的分子机制,关于终末分化细胞命运维持的相关研究却相对较少。本研究以成体果蝇肠道为模型,旨在探寻维持终末分化细胞命运的分子机制。我们前期研究发现转录抑制因子Ttk69对维持肠细胞(EC)命运至关重要。在EC中敲低ttk69会导致其特征基因的下调,并启动多种肠内分泌细胞特征基因表达。我们将进一步通过遗传学研究,结合转录组,蛋白-DNA互作以及染色质开放性等分析,探究Ttk69维持EC命运的分子机制。此外,鉴于ttk的缺失只能诱导部分EC的转分化,我们也将利用单细胞转录组测序等手段,探寻导致转分化响应异质性的调控因子。总之,本研究通过研究果蝇肠细胞和肠分泌细胞的命运维持和转换机制,将为进一步理解终末分化细胞的命运维持及可塑性提供理论基础。
英文摘要
Tissue homeostasis driven by local stem cells requires coordinated specification of multiple cell lineages and maintenance of differentiated cell identity. Regulators modulating stem cell proliferation and differentiation have been extensively investigated, while factors safeguarding mature cell identity attract less attention. Using the Drosophila intestine as a model system, this study aims to reveal mechanisms that maintain cell fate identity of mature enterocytes (ECs) and enteroendocrine cells (EEs). Our preliminary studies have revealed that Ttk69, a master repressor of EE fate in Drosophila intestinal progenitor cells, is continuously required in differentiated ECs for their identity maintenance. Depleting ttk69 in ECs causes cell-autonomous activation of various EE-specific markers, accompanying loss of EC-specific signature genes, indicating a direct trans-differentiation process between these two terminal differentiated cell types. Next, we will collectively use genetic analysis, as well as DNA binding profiles and chromatin accessibility analysis to further illustrate the underlying mechanisms of how Ttk69 maintains EC identity and suppresses cell fate conversion. Additionally, the degree of ttk69 depletion induced cell fate transformation was highly heterogeneous within different ECs, which lead us to seek for additional factors that helps to maintain EC identity, by using approaches including ATAC-sequencing, single cell RNA-sequencing and genetic screening. To conclude, this project would clarify the interconvertibility between absorptive and secretory cells in the intestine and establish a genetic model system for further understanding cell fate maintenance and plasticity among terminal differentiated cell types, which might also occur in various physiological and pathological conditions.
成体组织的稳态不仅需要成体干细胞的有序增殖与分化,也有赖于终末分化的体细胞状态的稳定维持。终末分化细胞的命运转变会干扰其正常的生物学功能,甚至导致癌症。另一方面,诱导成体细胞的命运转化也是治疗如糖尿病,阿尔兹海默症等退行性疾病的重要途径。因此,了解终末分化细胞命运如何建立和维持,对于实现定向诱导和高效的细胞命运重编程至关重要。.在本项目中,我们以果蝇肠道为模型,发现两个关键转录因子,ttk69 和 prospero,分别作为主调节因子来维持肠上皮中两种终末分化细胞——肠细胞(EC)和肠内分泌细胞(EE)的命运特征。Ttk69 的缺失会导致肠细胞向肠内分泌细胞的身份转分化,而在成熟EE中敲除prospero 则会导致内分泌特征基因表达的丢失,并诱导其去分化为肠干细胞。此外,内分泌细胞(EE)谱系进一步特化出具有各自特征肽激素生成的不同亚型。我们也系统揭示了控制这些内分泌细胞亚型多样化的转录因子代码,并且通过操控亚型特征转录因子如 Mirr 和 Fer1,能够有效地诱导不同内分泌细胞亚型间的重编程,并诱导目标肽激素的表达。进一步的机制研究发现,尽管这些细胞被不同的细胞命运决定因子驱动,表现出各异的转录特征,但肠道上皮中同一成体干细胞谱系内所有这些细胞的染色质可及性景观的高度相似性,促进了不同终末分化细胞类型之间广泛的细胞重编程发生。基于这一细胞命运转分化的内源动物模型进行遗传筛选,进一步发现移除包括NuRD 染色质重塑复合物、细胞谱系冲突,以及细胞多倍化等一系列阻碍因子,显著提高了ttk69 敲除诱导 EC 向 EE 的转分化效率。.综上,基于本项研究,我们建立了遗传可操作的细胞命运转分化的体内模型,这将有助于从分子和遗传层面探究细胞可塑性的机制;同时,染色质可及性的高度相似性所驱动的细胞命运可塑性,进一步凸显了诱导同一干细胞谱系内不同细胞之间的转分化以补充神经元或β细胞等损伤所导致退行性疾病的潜在价值。
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