The Protein Data Bank: Unifying the archive

The Protein Data Bank: Unifying the archive
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DOI:
10.1093/nar/30.1.245
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发表时间:
2002-01-01
影响因子:
14.9
通讯作者:
Berman, HM
Berman, HM
中科院分区:
生物学2区
文献类型:
--
作者:
Westbrook, J;Feng, ZK;Berman, HM

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蛋白质数据库(PDB; http://www.pdb.org/)是生物大分子结构数据的唯一全球存档。本文介绍了在验证PDB存档中的所有数据和为社区发布统一存档方面所取得的进展。我们现在已经为PDB存档(ftp://beta.rcsb.org/pub/pdb/uniformity/data/mmCIF/)生成了一组mmCIF数据文件。还发布了将mmCIF数据文件转换为PDB格式的实用程序应用程序(称为CIFTr),以支持现有软件。
The Protein Data Bank (PDB; http://www.pdb.org/) is the single worldwide archive of structural data of biological macromolecules. This paper describes the progress that has been made in validating all data in the PDB archive and in releasing a uniform archive for the community. We have now produced a collection of mmCIF data files for the PDB archive (ftp://beta.rcsb.org/pub/pdb/uniformity/data/mmCIF/). A utility application that converts the mmCIF data files to the PDB format (called CIFTr) has also been released to provide support for existing software.