A novel real-time PCR method for KIR genotyping

A novel real-time PCR method for KIR genotyping
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DOI:
10.1111/j.1399-0039.2008.01184.x
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发表时间:
2009-02-01
期刊:
影响因子:
--
通讯作者:
Canavez, F.
Canavez, F.
中科院分区:
医学4区
文献类型:
--
作者:
Alves, L. G. T.;Rajalingam, R.;Canavez, F.

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编码杀伤细胞免疫球蛋白样受体(KIR)的基因在个体之间存在差异。序列特异性引物引导的聚合酶链式反应(PCR)扩增(PCR-SSP)和PCR扩增产物的序列特异性寡核苷酸杂交(PCR-SSO)是目前用于表征KIR基因内容多样性的方法。这两种方法都包括耗时的 PCR 后分析。在这里,我们开发了一种实时 PCR 方法,可在 PCR 过程中识别 16 个 KIR 基因是否存在,并避免 PCR 后分析。该方法特异、灵敏,与传统PCR-SSP和PCR-SSO方法相比缩短了周转时间,并且易于实现自动化。
Genes encoding killer cell immunoglobulin-like receptors (KIRs) are variable among individuals. Sequence-specific primer-directed polymerase chain reaction (PCR) amplification (PCR-SSP) and sequence-specific oligonucleotide hybridization of the PCR-amplified products (PCR-SSO) are the methods currently used to characterize the diversity of KIR gene content. Both these methods include time-consuming post-PCR analyses. Here, we developed a real-time PCR method that identifies the presence or absence of 16 KIR genes during PCR and avoids post-PCR analyses. This method is specific, sensitive, shortens the turnaround time compared with the conventional PCR-SSP and PCR-SSO methods, and it can be easily adapted for automation.