BioIE: extracting informative sentences from the biomedical literature
BioIE: extracting informative sentences from the biomedical literature
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DOI：
10.1093/bioinformatics/bti296
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发表时间：
2005-05-01
期刊：
影响因子：
5.8
通讯作者：
Attwood, TK
中科院分区：
文献类型：
--
作者：
Divoli, A;Attwood, TK
BioIE 是一个基于规则的系统，它从生物医学文献中提取与蛋白质家族、其结构、功能和疾病相关的信息句子。基于手动定义的模板和规则，它的目标是精确的句子提取而不是广泛的回忆。上传源文本或从 MEDLINE 检索摘要后，用户可以根据预定义或用户定义的模板类别提取句子。 BioIE 还通过查看单词、N-gram 和 MeSH 术语分布，提供对源文本的句法和语义上下文的简要洞察。 BioIE 的重要应用包括微阵列数据和蛋白质数据库的注释等。
BioIE is a rule-based system that extracts informative sentences relating to protein families, their structures, functions and diseases from the biomedical literaturE. Based on manual definition of templates and rules, it aims at precise sentence extraction rather than wide recall. After uploading source text or retrieving abstracts from MEDLINE, users can extract sentences based on predefined or user-defined template categories. BioIE also provides a brief insight into the syntactic and semantic context of the source-text by looking at word, N-gram and MeSH-term distributions. Important Applications of BioIE are in, for example, annotation of microarray data and of protein databases.