VANO: a volume-object image annotation system.

VANO: a volume-object image annotation system.
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VANO:体积-对象图像注释系统。

DOI:
10.1093/bioinformatics/btp046
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发表时间:
2009-03-01
期刊:
影响因子:
5.8
通讯作者:
Myers, Eugene W.
Myers, Eugene W.
中科院分区:
生物学3区
文献类型:
--
作者:
Peng, Hanchuan;Long, Fuhui;Myers, Eugene W.

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体积对象注释系统(VANO)是一个跨平台的图像注释系统,使人们能够方便地可视化和注释包括细胞核和细胞的3D体积对象。VANO的应用通常从分割计算产生的对象的初始集合开始。然后可以对对象进行标记、分类、删除、添加、拆分、合并和重新定义。VANO已被用于建立秀丽隐杆线虫L1期细胞核和黑腹果蝇胚胎晚期腹神经索细胞核的高分辨率数字图谱。可用性:VANO的平台独立可执行文件、示例数据集以及其设计和使用的详细描述可在research.janelia.org/peng/proj/vano上获得。VANO是开源的共同开发。联系方式:pengh@janelia.hhmi.org补充信息:补充数据可在生物信息学在线获得。
Volume-object annotation system (VANO) is a cross-platform image annotation system that enables one to conveniently visualize and annotate 3D volume objects including nuclei and cells. An application of VANO typically starts with an initial collection of objects produced by a segmentation computation. The objects can then be labeled, categorized, deleted, added, split, merged and redefined. VANO has been used to build high-resolution digital atlases of the nuclei of Caenorhabditis elegans at the L1 stage and the nuclei of Drosophila melanogaster's ventral nerve cord at the late embryonic stage. Availability: Platform independent executables of VANO, a sample dataset, and a detailed description of both its design and usage are available at research.janelia.org/peng/proj/vano. VANO is open-source for co-development. Contact: pengh@janelia.hhmi.org Supplementary information: Supplementary data are available at Bioinformatics online.
生物图像信息学:工程生物学的新领域。
DOI: 10.1093/bioinformatics/btn346
发表时间: 2008-09-01
期刊: BIOINFORMATICS
影响因子: 5.8
作者:
Peng, Hanchuan
通讯作者: Peng, Hanchuan
DOI: 10.1093/bioinformatics/btl680
发表时间: 2007-03-01
期刊: BIOINFORMATICS
影响因子: 5.8
作者:
Zhou, Jie;Peng, Hanchuan
通讯作者: Peng, Hanchuan
DOI: 10.1093/bioinformatics/btm569
发表时间: 2008-01-15
期刊: BIOINFORMATICS
影响因子: 5.8
作者:
Peng, Hanchuan;Long, Fuhui;Myers, Eugene W.
通讯作者: Myers, Eugene W.