Biopython: freely available Python tools for computational molecular biology and bioinformatics.

Biopython: freely available Python tools for computational molecular biology and bioinformatics.
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Biopython:用于计算分子生物学和生物信息学的免费 Python 工具。

DOI:
10.1093/bioinformatics/btp163
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发表时间:
2009-06-01
期刊:
Bioinformatics (Oxford, England)
影响因子:
--
通讯作者:
de Hoon MJ
de Hoon MJ
中科院分区:
其他
文献类型:
--
作者:
Cock PJ;Antao T;Chang JT;Chapman BA;Cox CJ;Dalke A;Friedberg I;Hamelryck T;Kauff F;Wilczynski B;de Hoon MJ

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摘要:Biopython项目是一个由志愿者开发人员组成的成熟的开源国际合作项目,为广泛的生物信息学问题提供了Python库。Biopython包括读写不同的序列文件格式和多个序列比对的模块,处理3D大分子结构,与常用工具如BLAST,Clusta W和Emoss交互,访问关键的在线数据库,以及提供统计学习的数值方法。可获得性:Biopython是免费提供的,在Biopython许可下,可以在www.biopython.org上找到文档和源代码。联系方式:所有查询都应指向Biopython邮件列表,请参阅www.biopython.org/wiki/_Mailing_listspeter.cock@scri.ac.uk.
Summary: The Biopython project is a mature open source international collaboration of volunteer developers, providing Python libraries for a wide range of bioinformatics problems. Biopython includes modules for reading and writing different sequence file formats and multiple sequence alignments, dealing with 3D macro molecular structures, interacting with common tools such as BLAST, ClustalW and EMBOSS, accessing key online databases, as well as providing numerical methods for statistical learning. Availability: Biopython is freely available, with documentation and source code at www.biopython.org under the Biopython license. Contact: All queries should be directed to the Biopython mailing lists, see www.biopython.org/wiki/_Mailing_listspeter.cock@scri.ac.uk.
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影响因子: 5.8
作者:
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