SBW - A Modular Framework for Systems Biology

SBW - A Modular Framework for Systems Biology
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SBW - 系统生物学的模块化框架

DOI:
10.5555/1218112.1218411
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发表时间:
2006
期刊:
Proceedings of the 2006 Winter Simulation Conference
影响因子:
--
通讯作者:
H. Sauro
H. Sauro
中科院分区:
--
文献类型:
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作者:
Frank T. Bergmann;H. Sauro

文献摘要

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大量的软件包可用于帮助系统生物学的研究人员。在本文中,我们描述了系统生物学工作台(SBW),一个模块化的框架,连接建模和分析应用程序,使他们能够重用对方的能力的当前状态。我们描述了用户和开发人员将如何感知SBW,然后专注于当前可用的SBW模块。该软件,教程手册和测试模型可以从凯克研究生院的计算和系统生物学小组免费获得。源代码可以从SourceForge获得。该软件是开源的,并在BSD下许可
A large number of software packages are available to assist researchers in systems biology. In this paper, we describe the current state of the systems biology workbench (SBW), a modular framework that connects modeling and analysis applications, enabling them to reuse each other's capabilities. We describe how users and developers will perceive SBW and then focus on currently available SBW modules. The software, tutorial manual, and test models are freely available from the Computational and Systems Biology group at Keck Graduate Institute. Source code is available from SourceForge. The software is open source and licensed under BSD