Natively glycosylated HIV-1 Env structure reveals new mode for antibody recognition of the CD4-binding site.

Natively glycosylated HIV-1 Env structure reveals new mode for antibody recognition of the CD4-binding site.
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DOI:
10.1038/nsmb.3291
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发表时间:
2016-10
影响因子:
16.8
通讯作者:
Bjorkman, Pamela J.
Bjorkman, Pamela J.
中科院分区:
生物学1区
文献类型:
--
作者:
Gristick, Harry B.;von Boehmer, Lotta;West, Anthony P., Jr.;Schamber, Michael;Gazumyan, Anna;Golijanin, Jovana;Seaman, Michael S.;Faetkenheuer, Gerd;Klein, Florian;Nussenzweig, Michel C.;Bjorkman, Pamela J.

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HIV-1疫苗设计通过结构研究来了解,这些结构研究阐明了广泛中和抗体(bNAb)识别和/或容纳三聚体包膜糖蛋白(Env)上的N-聚糖的机制。高甘露糖和复合型Env糖型的变异性导致异质性,这通常妨碍天然聚糖盾的可视化。我们提出了具有完全加工和天然糖基化的HIV-1 Env三聚体的3.5-ε-和3.9-ε-分辨率晶体结构,揭示了高甘露糖和复合型N-聚糖的聚糖屏蔽,我们使用它来定义两个bNAb的完整表位。Env三聚体与10-1074(针对V3环)和IOMA(一种新的CD 4结合位点(CD 4 bs)抗体)复合。尽管IOMA源自VH 1 -2*02(CD 4 bs靶向VRC 01类bNAb的种系基因),但其轻链缺乏定义VRC 01类bNAb的短CDRL 3。因此,IOMA类似于8ANC 131类/VH 1 -46衍生的CD 4 b bNAb,其具有正常长度的CDRL 3。组合了VRC 01类和8ANC 131类抗体的联合收割机特征的bNAb的存在对于靶向VRC 01样bNAb的免疫策略具有意义。
HIV-1 vaccine design is informed by structural studies elucidating mechanisms by which broadly neutralizing antibodies (bNAbs) recognize and/or accommodate N-glycans on the trimeric envelope glycoprotein (Env). Variability in high-mannose and complex-type Env glycoforms leads to heterogeneity that usually precludes visualization of the native glycan shield. We present 3.5-Å- and 3.9-Å-resolution crystal structures of the HIV-1 Env trimer with fully processed and native glycosylation, revealing a glycan shield of high-mannose and complex-type N-glycans, which we used to define complete epitopes of two bNAbs. Env trimer was complexed with 10-1074 (against the V3-loop) and IOMA, a new CD4-binding site (CD4bs) antibody. Although IOMA derives from VH1-2*02, the germline gene of CD4bs-targeting VRC01-class bNAbs, its light chain lacks the short CDRL3 that defines VRC01-class bNAbs. Thus IOMA resembles 8ANC131-class/VH1-46–derived CD4bs bNAbs, which have normal-length CDRL3s. The existence of bNAbs that combine features of VRC01-class and 8ANC131-class antibodies has implications for immunization strategies targeting VRC01-like bNAbs.
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