GGT 2.0: Versatile software for visualization and analysis of genetic data
GGT 2.0: Versatile software for visualization and analysis of genetic data
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DOI：
10.1093/jhered/esm109
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发表时间：
2008-03-01
影响因子：
3.1
通讯作者：
van Berloo, Ralph
中科院分区：
文献类型：
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作者：
van Berloo, Ralph
自1999年首次发布以来，用于分子标记数据可视化的免费软件GGT(GGT)一直在不断地修改和完善。GGT包是在植物育种的背景下开发的，因此侧重于植物遗传数据，但并不打算仅限于植物。目前的版本有许多用于种群遗传分析的选择，包括多样性分析和简单的关联研究。因此，本文介绍了GGT包的第二个版本GGT2.0(可通过http://www.plantbreeding.wur.nl)，获得)。概述了GGT 2.0中现有的和可用的新功能，并给出了一个应用GGT 2.0分析一组现有植物遗传数据的案例研究。
Ever since its first release in 1999, the free software package for visualization of molecular marker data, graphical genotype (GGT), has been constantly adapted and improved. The GGT package was developed in a plant-breeding context and thus focuses on plant genetic data but was not intended to be limited to plants only. The current version has many options for genetic analysis of populations including diversity analyses and simple association studies. A second release of the GGT package, GGT 2.0 (available through http://www.plantbreeding.wur.nl), is therefore presented in this paper. An overview of existing and new features that are available within GGT 2.0, and a case study in which GGT 2.0 is applied to analyze an existing set of plant genetic data, are presented and discussed.