CAREER: Structural dynamics and mechanisms of photoreceptor signaling
CAREER: Structural dynamics and mechanisms of photoreceptor signaling
批准号:
2042704
负责人:
Jarrod French
金额:
$56.41万
依托单位国家:
美国
项目类别:
Continuing Grant
财政年份:
2020
资助国家:
美国
项目状态:
已结题
起止时间:
2020-11-01 至 2024-04-30
中文摘要
光感受器使生物体能够介导对光的广泛生物反应,包括光合作用、细胞和细胞器运动、视觉转导和昼夜节律。这些重要的细胞介质与生物膜的形成有关,并且可以改变生物体的毒力。光感受器也是光驱动设备的原型。阐明光感受器的潜在操作机制仍然是光遗传学领域发展的关键驱动力。在大多数情况下,光的吸收导致所涉及的蛋白质的化学和结构变化,最终产生生物输出。尽管进行了广泛的研究,但人们对这种信号如何传播的许多细节知之甚少。本项目的目的是确定耦合光吸收的下游生物过程中的一个特定类别的光感受器的激活的潜在分子机制。这项工作将产生第一个时间分辨的分子描述的状态之间的动态转换的蓝光使用Flavoprotein(BLUF)类蛋白质,并通过提供结构工具,将使更有效和更有效的系列晶体学实验。该项目的教育目标是产生一个混合的研究/教育结构蛋白质组学管道,涉及本科生和高中生群体。这一众包计划不仅为学生群体提供了一个在受控环境中进行实践、“真实的”研究的机会,而且将利用人数优势来解决一个具有挑战性和根本重要性的研究问题。研究和教育的目标将通过他们的平行使用X射线晶体学和通过研究生的参与和监督在这两个方面的拟议work.The研究项目的目标是确定内在的分子决定因素和动态结构特征,驱动结构变化和信号事件在蓝光使用FAD(BLUF)蛋白。特别是,将阐明在黑暗到光明的转变过程中驱动信号转导的分子变化,并确定特定BLUF受体蛋白和复合物的光诱导复合的机制。这些研究将整合时间分辨光谱方法与静态和动态结构表征,以映射感光体激活过程中发生的空间和时间变化。此外,将开发和实施声学介导的连续晶体学方法。这种方法将用于生成BLUF蛋白中信号转导期间发生的结构变化的分子电影,并将广泛适用于作为在任何X-射线衍射条件下对广泛样品进行有效时间分辨结构研究的手段。该奖项反映了NSF的法定使命,并被认为是值得通过使用基金会的知识价值和更广泛的影响审查标准进行评估的支持。
英文摘要
Photoreceptors enable organisms to mediate a vast range of biological responses to light, including photosynthesis, cell and organelle motility, visual transduction and circadian rhythms. These important cellular mediators are implicated in biofilm formation and can alter the virulence of organisms. Photoreceptors are also the prototype for light driven devices. Elucidating the underlying mechanisms of operation of photoreceptors remain a key driver for the development of the field of optogenetics. In most cases, the absorption of light results in chemical and structural changes of the proteins involved that ultimately produce the biological output. Despite extensive studies, many of the details of how this signal is propagated are poorly understood. The objective of this project is to determine the underlying molecular mechanisms that couple light absorption to the activation of downstream biological processes in a specific class of photoreceptors. This work will generate the first time-resolved molecular description of the dynamic transition between states for the Blue Light Using Flavoprotein (BLUF) class of proteins and by providing structural tools that will enable more efficient and effective serial crystallography experiments. The educational objective of this project is to generate a hybrid research/educational structural proteomics pipeline, involving groups of undergraduates and high school students. This crowd-sourcing program will not only provide an opportunity for groups of students to conduct hands-on, 'real' research in a controlled setting, but will leverage the strength in numbers to address a challenging and fundamentally important research problem. The research and educational objectives will be integrated through their parallel use of X-ray crystallography and through graduate student involvement and oversight in both aspects of the proposed work.The research objective of this project is to determine the intrinsic molecular determinants and dynamic structural features that drive structural changes and signaling events in blue-light using FAD (BLUF) proteins. In particular, the molecular changes that drive signal transduction during the dark to light transition will be elucidated and the mechanism of photo-induced complexation of specific BLUF receptor proteins and complexes will be determined. These studies will integrate time-resolved spectroscopic methods with static and dynamic structural characterization to map the spatial and temporal changes that occur during photoreceptor activation. In addition, an acoustically-mediated serial crystallography approach will be developed and implemented. This approach will be used to generate molecular movies of the structural changes that occur during signal transduction in BLUF proteins and will be broadly applicable as a means to conduct efficient time-resolved structural studies on a broad range of samples at any X-ray source.This award reflects NSF's statutory mission and has been deemed worthy of support through evaluation using the Foundation's intellectual merit and broader impacts review criteria.
期刊论文(7)
专著(0)
科研奖励(0)
会议论文
DOI:
10.1021/acs.jpcb.0c04943
发表时间:
2020-08-20
期刊:
The journal of physical chemistry. B
影响因子:
--
作者:
[Iuliano JN, Hall CR, Green D, Jones GA, Lukacs A, Illarionov B, Bacher A, Fischer M, French JB, Tonge PJ, Meech SR]
通讯作者:
Meech SR
DOI:
10.1021/acs.biochem.3c00640
发表时间:
2024-02-02
期刊:
BIOCHEMISTRY
影响因子:
2.9
作者:
[De Vitto,Humberto, Belfon,Kafi K. J., French,Jarrod B.]
通讯作者:
French,Jarrod B.
Collaborative Research: REU Site: Molecular Interactions Virtual REU
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批准号:2149978
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项目类别:Standard Grant
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资助金额:$31.79万
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财政年份:2022
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负责人:Jarrod French
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依托单位:
REU Site: Molecular Interactions Virtual REU
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批准号:2051087
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项目类别:Standard Grant
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资助金额:$9.73万
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财政年份:2021
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负责人:Jarrod French
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依托单位:
CAREER: Structural dynamics and mechanisms of photoreceptor signaling
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批准号:1750637
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项目类别:Continuing Grant
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资助金额:$80.0万
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财政年份:2018
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负责人:Jarrod French
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依托单位:
IDBR: TYPE A Precise Manipulation and Patterning of Protein Nanocrystals Using Surface Acoustic Wave Technology
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批准号:1455596
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项目类别:Continuing Grant
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资助金额:$28.85万
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财政年份:2015
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负责人:Jarrod French
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依托单位:
国内基金
海外基金
Understanding structural evolution of galaxies with machine learning
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批准号:
-
项目类别:省市级项目
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资助金额:10.0万元
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批准年份:2022
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负责人:Nicola Rosario Napolitano
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依托单位: