IntBIO: Collaborative Research: Functional Synergy Between Disordered Proteins and their Environment in Desiccation Protection

随着我们的气候变化，动物和植物越来越容易脱水。值得注意的是，一个共同的策略，已经演变成帮助所有生命王国的生物体处理干燥是通过合成一类特殊的蛋白质称为内在无序蛋白质。尽管它们在保护动物和植物免受干旱方面很重要，但这些蛋白质如何工作还没有得到解决。该项目将联合收割机实验，从单个分子到整个生物体，以了解无序蛋白质如何在所有生命王国中提供脱水保护。作为这项研究的一部分，该项目将通过远程学习从农村社区招募学生，并将他们纳入尖端的跨学科研究，这将有助于他们融入美国STEM劳动力。所有生命王国中的蛋白质组都含有相当大一部分本质上无序的序列，并且不采用稳定的三维结构。相反，这些序列存在于快速相互转换的构象的集合中，这些构象对它们发挥功能的细胞环境的变化高度敏感。有趣的是，许多这些无序的蛋白质都涉及介导对环境胁迫的抗性，包括干燥，其中细胞的物理化学组成发生显着变化。该项目的目标是全面了解无序蛋白质和细胞环境如何在极端干燥期间共同为细胞提供保护。为了实现这一目标，该项目将采用多层次、跨学科和综合的方法。从分子水平开始，将进行体外和计算实验，以深入了解干燥保护无序蛋白质如何与明确定义和可控的环境一起发挥作用。这些信息将与酵母（细胞水平）和多细胞动物模型（线虫，秀丽隐杆线虫，有机体水平）中进行的高通量，基于测序的无序蛋白介导的脱水保护研究相结合。该奖项反映了NSF的法定使命，并被认为值得通过使用基金会的智力价值和更广泛的影响审查标准进行评估来支持。

As our climate changes, animals and plants are increasingly exposed to dehydration. Remarkably, a common strategy that has evolved to help organisms across all kingdoms of life deal with desiccation is through the synthesis of a special class of proteins known as intrinsically disordered proteins. Despite their importance in protecting animals and plants from drying out, how these proteins work is unresolved. This project will combine experiments that span individual molecules to whole organisms to understand how disordered proteins provide protection from dehydration across all kingdoms of life. As part of this study, this project will recruit students from rural communities via remote-learning and include them in cutting edge, interdisciplinary research which will facilitate their integration into the US STEM workforce. Proteomes across all kingdoms of life contain a significant fraction of sequences that are intrinsically disordered and do not adopt a stable three-dimensional structure. Instead, these sequences exist in an ensemble of rapidly interconverting conformations that can be highly sensitive to changes in the cellular environment in which they function. Interestingly, many of these disordered proteins are implicated in mediating resistance to environmental stresses, including desiccation, in which the physical-chemical composition of the cell changes dramatically. The goal of this project is to gain a holistic understanding of how disordered proteins and the cellular environment come together to provide protection to the cell during extreme desiccation. Towards this goal, the project will employ a multilevel, interdisciplinary, and integrated approach. Starting at the molecular level, in vitro and computational experiments will be performed that will provide insight into how desiccation-protective disordered proteins function in conjunction with well defined and controllable environments. This information will be integrated with high throughput, sequencing-based studies of disordered protein-mediated desiccation protection performed in yeast (cellular level), and a multicellular animal model (the roundworm, Caenorhabditis elegans, organismal level).This award reflects NSF's statutory mission and has been deemed worthy of support through evaluation using the Foundation's intellectual merit and broader impacts review criteria.