Elucidation of the mutation rate as driver of insect endosymbiont genome evolution
Elucidation of the mutation rate as driver of insect endosymbiont genome evolution
批准号:
21H02541
负责人:
ブギーニョン トマ
金额:
$7.32万
依托单位国家:
日本
项目类别:
Grant-in-Aid for Scientific Research (B)
财政年份:
2021
资助国家:
日本
项目状态:
已结题
起止时间:
2021-04-01 至 2024-03-31
中文摘要
在这个项目中,我们的目标是研究Blattabacterum基因组的进化。为此,我们计划对许多Blattabacterum基因组进行测序。我们已经测序了448个Blattabacterum基因组。虽然其中一些没有组装成单一的重叠群,但超过250个组装成了重叠群。对于那些没有在单个重叠群中测序的基因,我们计划在2023财年进行额外的测序。我们获得的所有完整基因组都已被注释,我们正在分析它们。我已经为这个项目发表了两篇科学论文。一篇论文发表在《分子生物学与进化》(IF:16.2),一篇论文发表在《分子系统发生与进化》(IF:4.3)。这些论文的参考文献如下:Kinso Y.*,Lo N.*(与第一作者相同),Villa-Martin P.,Tokuda G.,Pigolotti S.和Bourguignon T.(2021)在蟑螂内共生菌Blattabacterium中,突变率提高、宽松选择和多米诺骨牌效应与基因丢失有关。《分子生物学与进化》,38,3820-3831。车勇,邓伟,李伟,张军,金田勇,德田,布尔吉尼翁,罗宁,王正(2022)。从线粒体基因组和核基因(18S,28S)推断的替代和扩散事件塑造了全球隐尾藻的分布。分子系统发育与进化166号,107318号。取得的成绩与原计划一致。
英文摘要
In this project, we aim to study the evolution of Blattabacterium genomes. We planned to sequence many Blattabacterium genomes for that purpose. We have sequenced 448 Blattabacterium genomes. While some of them were not assembled in a single contig, over 250 were. For those that were not sequenced in a single contig, we are planning extra sequencing during FY2023. All the full genomes we obtained have been annotated, and we are in the process of analyzing them.I have published two scientific papers for this project. One paper was published in Molecular Biology and Evolution (IF: 16.2), and one paper was published in Molecular Phylogenetics and Evolution (IF: 4.3). The references of these paper are as follow: Kinjo Y.*, Lo N.* (*equal first authors), Villa-Martin P., Tokuda G., Pigolotti S. & Bourguignon T. (2021) Enhanced mutation rate, relaxed selection, and the ‘domino effect’ are associated with gene loss in Blattabacterium, a cockroach endosymbiont. Molecular Biology and Evolution, 38, 3820-3831. Che Y., Deng W., Li W., Zhang J., Kinjo Y., Tokuda G., Bourguignon T., Lo N. & Wang Z. (2022). Vicariance and dispersal events inferred from mitochondrial genomes and nuclear genes (18S, 28S) shaped global Cryptocercus distributions. Molecular Phylogenetic and Evolution 166, 107318. The achievements are as originally planned.
期刊论文(6)
专著(0)
科研奖励(0)
会议论文
Vicariance and dispersal events inferred from mitochondrial genomes and nuclear genes (18S, 28S) shaped global Cryptocercus distributions
从线粒体基因组和核基因(18S,28S)推断的变异和扩散事件塑造了全球隐尾蚴分布
DOI:
10.1016/j.ympev.2021.107318
发表时间:
2022
期刊:
Molecular Phylogenetics and Evolution
影响因子:
4.1
作者:
[Yanli Che, Wenbo Deng, Weijun Li, Jiawei Zhang, Yukihiro Kinjo, Gaku Tokuda, Thomas Bourguignon, Nathan Lo, Zongqing Wang]
通讯作者:
Zongqing Wang
Genome evolution of the cockroach endosymbiont, Blattabacterium cuenoti
蟑螂内共生体Blattabacteruenoti的基因组进化
DOI:
--
发表时间:
2021
期刊:
影响因子:
--
作者:
[Sasaki Ken, Okada Yasukazu, Shimoji Hiroyuki, Aonuma Hitoshi, Miura Toru, Tsuji Kazuki, Thomas Bourguignon]
通讯作者:
Thomas Bourguignon
Toward the development of a high-throughput reconstruction method of termite gut bacterial genomes
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批准号:23K18035
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项目类别:Grant-in-Aid for Challenging Research (Exploratory)
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资助金额:$3.49万
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财政年份:2023
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负责人:ブギーニョン トマ
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依托单位:
シロアリとその細胞内バクテリアの共生
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批准号:19F19819
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项目类别:Grant-in-Aid for JSPS Fellows
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资助金额:$1.41万
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财政年份:2019
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负责人:ブギーニョン トマ
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依托单位:
海外基金