Elucidation for the catalytic function of cytochrome P450cam by site-specific incorporation of natural and unnatural amino acid.
Elucidation for the catalytic function of cytochrome P450cam by site-specific incorporation of natural and unnatural amino acid.
批准号:
05454636
负责人:
SHIMADA Hideo
金额:
$4.22万
依托单位:
依托单位国家:
日本
项目类别:
Grant-in-Aid for General Scientific Research (B)
财政年份:
1993
资助国家:
日本
项目状态:
已结题
起止时间:
1993 至 1994
中文摘要
细胞色素P450cam (Cytochrome P450cam)是一种含血红素的单加氧酶,可催化d-樟脑+ NADH + H^+ + O_2 * 5-外羟基樟脑+ H_2O + NAD^+的反应。在这个反应中,NADH的2个电子通过聚合还原酶和聚合还原蛋白(Pdx)传递到P450cam。P450cam在其处于铁态和随后的氧-铁态的步骤中被Pdx还原。在两年的项目中,我们发现P450cam中的一种表面残留物Arg112对第一和第二还原步骤至关重要。动力学研究表明:1)Arg112是Pdx的结合位点,2)Arg112是分子内电子转移(Pdx-P450cam)的重要残基,也是控制P450cam血红素片段氧化还原电位的重要残基。本项目的另一个重要成果是我们成功地将位点特异性非天然氨基酸0-甲基苏氨酸掺入P450cam的112位。对该突变体的催化活性测定表明,该突变体酶的耗氧活性仅为野生型酶的三分之一,但将消耗的分子二氧的氧原子全部吸收到d-樟脑的5-外显位。这表明苏氨酸的羟基在单氧反应中并不是必不可少的。我们之前的研究表明,只有当羟基位于P450cam的112位时,d-樟脑的单氧合才能有效地完成。基于这些和其他结果,我们提出了质子供体和/或酸催化作为Thr252的作用。为了验证Thr的这一作用,我们计划了这个项目,并成功地展示了非天然氨基酸的位点特异性掺入对阐明酶的催化机制的重要性。
英文摘要
Cytochrome P450cam (P450cam) is a heme-containing monooxygenase that catalyzes the reaction : d-camphor + NADH + H^+ + O_2 * 5-exo-hydroxycamphor + H_2O + NAD^+. In this reaction, 2 electrons from NADH are deliveredto P450cam via putidaredoxinreductaseand putidaredoxin (Pdx). P450cam is reduced by Pdx at the step where it is in the ferric and subsequent oxy-ferrous states.During two years of this project, we have found that a surface residue, Arg112 in P450cam is crucial for the first and second reduction steps. Kinetic studies suggests that : 1) Arg112 forms the binding site for Pdx. 2) Arg112 is an important residue for intramolecular electron transfer (Pdx-P450cam) and also for controlling redox potentials of the P450cam heme-moiety. Another important results of this project is that we have successfully incorporated site-specifically unnatural amino acid, 0-methyl-threonine to the 112 position of P450cam. Catalytic activity measurement of this mutant shows that the mutant enzyme incorporates all the oxygen atom of molecular dioxygen consumed to 5-exo-position of d-camphor, although oxygen consuming activity is one third of that of the wild-type enzyme. This results indicate that the hydroxygroup of threonine is not indispensable for the monooxygenation reaction.We previously showed that monooxygnation of d-camphor was only accomplished efficiently when the hydroxygroup is at 112 position of P450cam. Based on these and other results, we proposed a proton donor and/or acid catalysis as a role of Thr252. In order to validate this proposed role of Thr, we have planned this project and showed successfully the importance of the site-specific incorporation of unnatural amino acid to elucidate the catalytic mechanism of the enzyme.
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Makino,Ryu: "Cyotchrome P-450 2nd edition (Kodansyha,Tokyo)" Structure of Cytochrome P-450, 17-30 (1993)
Makino,Ryu:“细胞色素 P-450 第 2 版(Kodansyha,东京)” 细胞色素 P-450 的结构,17-30 (1993)
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Makino, R.: Structure of Cytochrome P-450. Cyotchrome P-450 (T.Omura, Y.Ishimura and Y.Fujii-Kuriyama) pp.17-30, Kodansya, Tokyo, (1993)
Makino, R.:细胞色素 P-450 的结构。
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Shimada,Hideo: "CYTOCHROME P450 : Biochemistry,Biophysics and Molecular Biology (John Libbey) (EUROTEXT)" Proton and electron transfer mechansim in dioxygen activation by cytochrome P450cam, 299-306 (1994)
Shimada,Hideo:“CYTOCHROME P450:生物化学、生物物理学和分子生物学(John Libbey)(EUROTEXT)”细胞色素 P450cam 在双氧活化中的质子和电子转移机制,299-306(1994)
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江川 毅: "チトクロームP450cam Compound Iの吸収スペクトル" 生化学. 66. 1046 (1994)
Takeshi Ekawa:“细胞色素 P450cam 化合物 I 的吸收光谱”生物化学 66. 1046 (1994)。
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Shimada,Hideo: "CYTOCHROME P450:Biochemistry,Biophysics and Molecular Biology.Proton and electron transfer mechansim in dioxygen activation by cytochrome P450cam" John Libbey EUROTEXT, 299-306 (1994)
Shimada,Hideo:“细胞色素 P450:生物化学、生物物理学和分子生物学。细胞色素 P450cam 激活双氧中的质子和电子转移机制”John Libbey EUROTEXT,299-306 (1994)
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共 29 条
Studies by molecular biological methods on proton pumping mechanisms of bovine heart and bacterial cytochrome c oxidases
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批准号:21370073
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项目类别:Grant-in-Aid for Scientific Research (B)
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资助金额:$12.15万
-
财政年份:2009
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负责人:SHIMADA Hideo
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依托单位:
Studies on the entry site of protons necessary for the monooxygenation reaction catalyzed by cytochrome P450cam
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批准号:13680750
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项目类别:Grant-in-Aid for Scientific Research (C)
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资助金额:$2.3万
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财政年份:2001
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负责人:SHIMADA Hideo
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依托单位:
Development of heme-based highly efficient biocatalysts
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批准号:13125208
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项目类别:Grant-in-Aid for Scientific Research on Priority Areas
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资助金额:$25.98万
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财政年份:2001
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负责人:SHIMADA Hideo
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依托单位:
Investigation on Ligand Active Conformer of Bovine Myoglobin.
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批准号:61580238
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项目类别:Grant-in-Aid for General Scientific Research (C)
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资助金额:$0.9万
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财政年份:1986
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负责人:SHIMADA Hideo
-
依托单位:
海外基金