Structure analysis of high-molecular weight intrinsically disordered proteins using 13C detection NMR approach
Structure analysis of high-molecular weight intrinsically disordered proteins using 13C detection NMR approach
批准号:
23659024
负责人:
TATE Shinichi
金额:
$2.41万
依托单位:
依托单位国家:
日本
项目类别:
Grant-in-Aid for Challenging Exploratory Research
财政年份:
2011
资助国家:
日本
项目状态:
已结题
起止时间:
2011 至 2012
中文摘要
我们用~(13)C和~1H检测核磁共振方法对酵母细胞中常见的转录因子Tfa2进行了分析。在这项工作中,我们特别关注Tfa2中的内在无序部分,它与中介复合体中的Gal11亚基结合。利用13C和15N进化轴解决了ID段典型的严重信号重叠,其化学位移比蛋白质中的其他核自旋具有显著的分散性。我们发现Tfa2的介体结合域Tfa2-Mbd瞬时形成三螺旋结构。瞬时结构的形成是由其同源二聚体的形成所介导的。我们还发现瞬时折叠结构具有与Gal11结合的能力,缺乏瞬时折叠能力的突变体不与Gal11结合。总体而言,本研究证明了与Tfa2中ID部分相关的独特结构和功能特性。
英文摘要
We analyzed one of the general transcription factors in yeast cell, Tfa2, with the 13C and 1H detection NMR methods. In this work, we particularly focused on the intrinsically disordered part in Tfa2, which binds to Gal11 subunit in the Mediator complex. The severe signal overlaps typically found for the ID segment were solved using the 13C and 15N evolution axes, whose chemical shifts have significant dispersions over the other nuclear spins in protein.We found the Mediator binding domain of Tfa2, Tfa2-mbd, transiently forms three-helix structure. The transient structure formation was mediated by its homo-dimer formation. We also found that the transiently folded structure has binding ability to Gal11; the mutant that lacks the transient folding ability does not bind to Gal11. Over all, the present research has demonstrated the unique structural and functional properties associated with the ID part in Tfa2.
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Structural implication for the impaired binding of W150A mutant LOX-1 to oxidized low density lipoprotein, OxLDL.
W150A 突变体 LOX-1 与氧化低密度脂蛋白 OxLDL 结合受损的结构意义。
DOI:
--
发表时间:
2012
期刊:
Biochimica et Biophysica Acta
影响因子:
--
作者:
[S. Nakano, Mamoru Sugihara, Risato Yamada, K. Katayanagi, S. Tate]
通讯作者:
S. Tate
"Complementary use of NMR to X-ray crystallography for the analysis of protein morphological change in solution" in ,Current trends in X-ray crystallography (ed. Chandrasekaran, A.)
“NMR 与 X 射线晶体学的补充用于分析溶液中蛋白质形态变化”,X 射线晶体学的当前趋势(Chandrasekaran,A. 编辑)
DOI:
--
发表时间:
2011
期刊:
InTech, Cloatia
影响因子:
--
作者:
[Tate,S. Imada,A., and Hiroguchi,N.]
通讯作者:
and Hiroguchi,N.
Gene regulation in thechromatin context seen from the protein structural dynamics point of view
从蛋白质结构动力学的角度看染色质背景下的基因调控
DOI:
--
发表时间:
2013
期刊:
影响因子:
--
作者:
[Anraku, M., et al, Tate,S.]
通讯作者:
Tate,S.
Functionally detuning motion for the hydride transfer step, which is intrinsically active loop dynamics of dihydrofolate reductase
氢化物转移步骤的功能失谐运动,这是二氢叶酸还原酶本质上活跃的环动力学
DOI:
--
发表时间:
2012
期刊:
影响因子:
--
作者:
[Anraku, M., et al, Tate,S., 國安 明彦, Shin-ichi Tate, 村木 一徳, 楯 真一, 國安 明彦, 楯 真一, 國安明彦, 楯 真一, 國安 明彦, Tate,S]
通讯作者:
Tate,S
Functional regulation through phosphorylation to acidic intrinsically disordered region in FACT as a chromatin remodeling factor
通过磷酸化 FACT 中酸性内在无序区域作为染色质重塑因子进行功能调节
DOI:
--
发表时间:
2011
期刊:
影响因子:
--
作者:
[Anraku, M., et al, Tate,S., 國安 明彦, Shin-ichi Tate, 村木 一徳, 楯 真一, 國安 明彦, 楯 真一, 國安明彦, 楯 真一, 國安 明彦, Tate,S, 村木 一徳, 國安 明彦, 楯 真一, 中村 優希, 楯 真一, 楯 真一, 楯 真一, 竹内 彩, 宮下由里奈, 楯 真一, 橋本愛美, Tate,S., 玉利 裕, 橋本愛美, 野坂佳加, 楯 真一, 楯 真一, Tate,S, 楯 真一, Tate,S]
通讯作者:
Tate,S
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Longer period to achieve low serum CA125 value and negative peritoneal cytology could predict positive lymph node status indicated as ovarian cancer stem cells in retroperitoneum.
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批准号:20791135
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项目类别:Grant-in-Aid for Young Scientists (B)
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资助金额:$2.66万
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财政年份:2008
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负责人:TATE Shinichi
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依托单位: