课题基金 / 基金详情

IRIS MODEL 4D220 VGX WORKSTATION

IRIS MODEL 4D220 VGX WORKSTATION
IRIS 型号 4D220 VGX 工作站
批准号:
3521158
负责人:
Suse Broyde
金额:
$15.7万
依托单位:
依托单位国家:
美国
项目类别:
财政年份:
1991
资助国家:
美国
项目状态:
已结题
起止时间:
1991-02-05 至 1992-08-04

项目摘要

项目成果

Suse Broyde的其他基金

相关文献

中文摘要
翻译
为IRIS 4D 220 VGX型计算机图形工作站寻求资金 以及其他配件。此工作站 将主要由五名教师及其同事组成的小组雇用 他们都致力于研究合成和结构的机制, 致癌物-DNA加合物的表征。工作站将是 用于反应机理和加合物的分子模拟 分子建模软件包INSIGHT/DISCOVER, Biosym Technologies,Inc.此外,该工作站还将用于 进行分子力学和分子动力学计算, 与我们自己的程序DUPLEX和AMBER加合。使用IRIS 计算密集型分子力学和动力学工作站 计算将缓解超级计算资源的限制, 成本要低得多。这些计算工作产生原子分辨率 加合物的观点与溶液中获得的实验数据一致 研究,并提供合理的结构信息的加合物,其中 目前没有数据。
英文摘要
Funds are sought for an IRIS Model 4D220 VGX Computer Graphics Workstation and accessories from Silicon Graphics Computer Systems. This workstation will be employed primarily by a group of five faculty and their associates who are all engaged in investigating mechanisms of synthesis and structural characterization of carcinogen-DNA adducts. The workstation will be employed in molecular modeling of reaction mechanisms and adduct conformations with the molecular modeling package INSIGHT/DISCOVER from Biosym Technologies, Inc. In addition, the workstation will be used to carry out molecular mechanics and molecular dynamics calculations for these adducts with our own program, DUPLEX, and with AMBER. Use of the IRIS workstation for the computation intensive molecular mechanics and dynamics calculations will alleviate supercomputing resource constraints, and will be far less costly. These computational efforts yield atomic resolution views of adducts in agreement with experimental data obtained in solution studies, and also offer plausible structural information for adducts where no data is at hand.
期刊论文(8)
专著(0)
科研奖励(0)
会议论文
Major and minor groove conformations of DNA trimers modified on guanine or adenine by 4-aminobiphenyl: adenine adducts favor the minor groove.
通过 4-氨基联苯:腺嘌呤加合物对鸟嘌呤或腺嘌呤进行修饰的 DNA 三聚体的大沟和小沟构象有利于小沟。
DOI: 10.1021/tx00043a016
发表时间: 1995
期刊: Chemical research in toxicology
影响因子: 4.1
作者: [Shapiro,R, Ellis,S, Hingerty,BE, Broyde,S]
通讯作者: Broyde,S
Molecular dynamics simulation of a tumorigenic benzo[a]pyrene metabolite bound to DNA at a single strand-double strand junction.
在单链-双链连接处与 DNA 结合的致瘤苯并[a]芘代谢物的分子动力学模拟。
DOI: --
发表时间: 1994
期刊: Annals of the New York Academy of Sciences
影响因子: 5.2
作者: [Singh,SB, Li,B, Hingerty,BE, Shapiro,R, Broyde,S]
通讯作者: Broyde,S
The ray projection method: a numerical approach for determining ideal camera placement.
射线投影法:一种用于确定理想相机位置的数值方法。
DOI: 10.1123/jab.23.1.79
发表时间: 2007
期刊: Journal of applied biomechanics
影响因子: 1.4
作者: [Manal,Kurt, Gardinier,Joseph]
通讯作者: Gardinier,Joseph
Conformational determinants of structures in stereoisomeric cis-opened anti-benzo[a]pyrene diol epoxide adducts to adenine in DNA.
DNA 中腺嘌呤立体异构顺式开环抗苯并[a]芘二醇环氧化物加合物结构的构象决定因素。
DOI: 10.1021/tx000094q
发表时间: 2000
期刊: Chemical research in toxicology
影响因子: 4.1
作者: [Tan,J, Geacintov,NE, Broyde,S]
通讯作者: Broyde,S
共 7 条
    Environmental DNA Lesions and Mutagenesis: Molecular Mechanisms of Lesion Recognition for Repair and Polymerase Bypass
    • 批准号:
      10460604
    • 项目类别:
    • 资助金额:
      $37.2万
    • 财政年份:
      2016
    • 负责人:
      Suse Broyde
    • 依托单位:
    Environmental Carcinogen-DNA Adducts: NER Recognition
    • 批准号:
      9275988
    • 项目类别:
    • 资助金额:
      $35.66万
    • 财政年份:
      2016
    • 负责人:
      Suse Broyde
    • 依托单位:
    Environmental DNA Lesions and Mutagenesis: Molecular Mechanisms of Lesion Recognition for Repair and Polymerase Bypass
    • 批准号:
      10612958
    • 项目类别:
    • 资助金额:
      $35.61万
    • 财政年份:
      2016
    • 负责人:
      Suse Broyde
    • 依托单位:
    Environmental DNA Lesions and Mutagenesis: Molecular Mechanisms of Lesion Recognition for Repair and Polymerase Bypass
    • 批准号:
      10293848
    • 项目类别:
    • 资助金额:
      $36.79万
    • 财政年份:
      2016
    • 负责人:
      Suse Broyde
    • 依托单位: