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MOLECULAR NETWORKS THAT COORDINATE DIFFERENTIATION

MOLECULAR NETWORKS THAT COORDINATE DIFFERENTIATION
协调分化的分子网络
批准号:
6636374
负责人:
WILLIAM F LOOMIS
金额:
$27.03万
依托单位国家:
美国
项目类别:
财政年份:
2000
资助国家:
美国
项目状态:
已结题
起止时间:
2000-07-01 至 2005-06-30

项目摘要

项目成果

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中文摘要
翻译
我们计划集中在一组基因,发挥至关重要的作用,在终末分化的网骨藻。 从我们正在进行的近饱和诱变筛选中发现的那些基因中选择三个基因。 这些基因的预测产物中的保守结构域表明它们可能在协调形态发生和封装的网络中起作用。cAMP依赖性蛋白激酶PKA在网骨藻的整个发育过程中起着关键作用,并在顶生过程中触发孢子的终末分化。 由于PKA的活性由cAMP的内部水平决定,因此该环核苷酸的合成和降解的相对速率对其调节至关重要。 我们建议深入研究的基因之一,acrA,编码一种新的腺苷酸环化酶,在后期发展中起着至关重要的作用。 我们将表征PKA的催化亚基过表达的菌株,以及编码发育腺苷酸环化酶的基因acaA和acrA失活的菌株,以确定在没有cAMP的情况下Dictyosteocytes可以发展的程度。acrA在两种主要细胞类型(前孢子或前柄细胞)中的仅一种中的表达将被分析,以测试在终末分化期间是否存在通过cAMP的细胞间通讯。在高潮期间观察到的cAMP的增加不仅取决于ACR,而且取决于细胞质磷酸二酯酶RegA的抑制。 在RegA的羧基末端结构域中有几个位点被MAP激酶磷酸化。这些位点被MAP激酶ERK 2磷酸化导致cAMP增加。 我们建议深入研究的另外两个基因,splA和mkcB,编码的蛋白质与激活MAP激酶级联的Raf-like蛋白激酶具有显著的相似性。 这些基因中的任何一个突变都会显著降低包囊的程度。 我们将确定这些蛋白激酶的显性活化形式是否可以拯救splA-或mkcB-菌株中孢子形成的阻断,以及使野生型细胞的孢子形成独立于前茎衍生信号。 这些结果将检验这样的假设,即分泌的信号肽SDF-2与组氨酸激酶受体DhkA结合,可能通过直接与Sp 1A相互作用来激活MAP激酶级联反应。 这些研究将有助于建立一个信号转导途径,可以作为其他系统的研究模型。
英文摘要
We plan to focus on a set of genes that play essential roles in terminal differentiation of Dictyostelium. Three genes were chosen from among those discovered in our on-going near- saturation mutagenesis screen. Conserved domains in the predicted products of these genes suggest that they may function in a network that coordinates morphogenesis and encapsulation. The cAMP dependent protein kinase, PKA, plays a critical role throughout development in Dictyostelium and triggers terminal differentiation of spores during culmination. Since the activity of PKA is determined by the internal levels of cAMP, the relative rates of synthesis and degradation of this cyclic nucleotide are central to its regulation. One of the genes we propose to study in depth, acrA, encodes a novel adenylyl cyclase that plays an essential role during late development. We will characterize strains in which the catalytic subunit of PKA is overexpressed and both of the genes encoding developmental adenylyl cyclases, acaA and acrA, are inactivated to establish the extent to which Dictyostelium can develop without cAMP. Expression of acrA in only one of the two major cell types, prespore or prestalk cells, will be analyzed to test whether there is intercellular communication through cAMP during terminal differentiation. The increase in cAMP that is observed during culmination not only depends on ACR but also on the inhibition of the cytoplasmic phosphodiesterase RegA. There are several sites in the carboxy- terminal domain of RegA that are phosphorylated by a MAP kinase. Phosphorylation of these sites by the MAP kinase ERK2 results in an increase in cAMP. The other two genes that we propose to study in depth, splA and mkcB, encode proteins that show significant similarity to Raf-like protein kinases that activate MAP kinase cascades. Null mutations in either of these genes reduce the extent of encapsulation dramatically. We will determine whether dominant activated forms of these protein kinases can rescue the block in spore formation in either splA- or mkcB- strain as well as make sporulation of wild type cells independent of prestalk derived signals. The results will test the hypothesis that a secreted signal peptide, SDF-2, that binds to the histidine kinase receptor, DhkA, activates the MAP kinase cascade, possibly by directly interacting with Sp1A. Together these studies will help to establish a signal transduction pathway that can serve as a model for studies in other systems.
期刊论文(9)
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会议论文
CbfA, the C-module DNA-binding factor, plays an essential role in the initiation of Dictyostelium discoideum development.
CbfA,C 模块 DNA 结合因子,在盘基网柄菌发育的启动中起着重要作用。
DOI: 10.1128/ec.3.5.1349-1358.2004
发表时间: 2004
期刊: Eukaryotic cell.
影响因子: --
作者: [Winckler,Thomas, Iranfar,Negin, Beck,Peter, Jennes,Ingo, Siol,Oliver, Baik,Unha, Loomis,WilliamF, Dingermann,Theodor]
通讯作者: Dingermann,Theodor
Percolation clustering: a novel approach to the clustering of gene expression patterns in Dictyostelium development.
渗滤聚类:盘基网柄菌发育中基因表达模式聚类的一种新方法。
DOI: 10.1142/9789814447362_0033
发表时间: 2001
期刊: Pacific Symposium on Biocomputing. Pacific Symposium on Biocomputing
影响因子: --
作者: [Sasik,R, Hwa,T, Iranfar,N, Loomis,WF]
通讯作者: Loomis,WF
Requirements for the adenylyl cyclases in the development of Dictyostelium.
盘基网柄菌发育过程中对腺苷酸环化酶的需求。
DOI: 10.1242/dev.128.18.3649
发表时间: 2001
期刊: Development (Cambridge, England)
影响因子: --
作者: [Anjard,C, Söderbom,F, Loomis,WF]
通讯作者: Loomis,WF
cAMP oscillations during aggregation of Dictyostelium.
盘基网柄菌聚集期间的 cAMP 振荡。
DOI: 10.1007/978-0-387-09794-7_3
发表时间: 2008
期刊: Advances in experimental medicine and biology
影响因子: --
作者: [Loomis,WilliamF]
通讯作者: Loomis,WilliamF
Project #5
Project #5
Project #5
Project 3: Cell Motility
海外基金