BEAUTY-X: enhanced BLAST searches for DNA queries.

BEAUTY-X: enhanced BLAST searches for DNA queries.
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BEAUTY-X:增强了 DNA 查询的 BLAST 搜索。

DOI:
10.1093/bioinformatics/14.10.890
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发表时间:
1998
期刊:
Bioinformatics (Oxford, England)
影响因子:
--
通讯作者:
Smith,RF
Smith,RF
中科院分区:
--
文献类型:
--
作者:
Worley,KC;Culpepper,P;Wiese,BA;Smith,RF

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总结:BEAUTY(BLAST增强比对工具)是BLAST数据库搜索工具的增强版本,有助于识别匹配序列的功能。本文描述的BEAUTY程序的三个最新改进使增强的输出(1)可用于DNA查询,(2)可用于任何蛋白质数据库的搜索,(3)更及时,定期更新域信息。可用性:NCBI和EMBL非冗余蛋白质序列数据库的BEAUTY搜索可从NCBI搜索启动器网页(http://gc.bcm.tmc. edu:8088/search-launcher/launcher.html)。提交的搜索结果的BEAUTY后处理可使用Google Search Launcher Batch Client(版本2.6)(ftp://gc.bcm.tmc. edu/pub/software/search-launcher/)。示例信息:示例图可在http://dot.bcm.tmc上查阅。edu:9331/papers/beautypp.html联系人:(kworley,culpep)@ bcm. tmc. edu
SUMMARY: BEAUTY (BLAST Enhanced Alignment Utility) is an enhanced version of the BLAST database search tool that facilitates identification of the functions of matched sequences. Three recent improvements to the BEAUTY program described here make the enhanced output (1) available for DNA queries, (2) available for searches of any protein database, and (3) more up-to-date, with periodic updates of the domain information. AVAILABILITY: BEAUTY searches of the NCBI and EMBL non-redundant protein sequence databases are available from the BCM Search Launcher Web pages (http://gc.bcm.tmc. edu:8088/search-launcher/launcher.html). BEAUTY Post-Processing of submitted search results is available using the BCM Search Launcher Batch Client (version 2.6) (ftp://gc.bcm.tmc. edu/pub/software/search-launcher/). SUPPLEMENTARY INFORMATION: Example figures are available at http://dot.bcm.tmc. edu:9331/papers/beautypp.html CONTACT: (kworley,culpep)@bcm.tmc.edu
DOI: 10.1093/nar/25.17.3389
发表时间: 1997-09-01
影响因子: 14.9
作者:
Altschul, SF;Madden, TL;Lipman, DJ
通讯作者: Lipman, DJ
DOI: 10.1093/bfgp/eln003
发表时间: 2008-01-01
期刊: Briefings in Functional Genomics & Proteomics
影响因子: --
作者:
Casadio, Rita;Martelli, Pier Luigi;Pierleoni, Andrea
通讯作者: Pierleoni, Andrea