Panzea: an update on new content and features.

Panzea: an update on new content and features.
复制标题

Panzea:​​新内容和功能的更新。

DOI:
10.1093/nar/gkm1022
复制
发表时间:
2008-01
影响因子:
14.9
通讯作者:
Ware, Doreen
Ware, Doreen
中科院分区:
生物学2区
文献类型:
--
作者:
Canaran, Payan;Buckler, Edward S.;Glaubitz, Jeffrey C.;Stein, Lincoln;Sun, Qi;Zhao, Wei;Ware, Doreen

文献摘要

参考文献

被引文献

相似文献

Panzea (http://www.panzea.org)是“玉米基因组的分子和功能多样性”项目的公共网站,在过去两年中,该网站在数据内容、展示工具和信息部分都有所扩展。数据内容扩展最显著的是单核苷酸多态性(SNP)、测序、同工酶和表型数据类型。我们增强了现有的网页显示工具,并推出了一些新的数据显示和分析工具。例如,我们已经实现了一个允许用户查找两个条目之间多态性的工具,一个地理地图工具,用于可视化snp,简单序列重复(SSRs)和同工酶等位基因的地理分布,以及Panzea标记和基因/位点在遗传和物理地图上的位置的图形视图。我们项目的信息学组件的一个目标是生成可以被其他组使用的代码。我们增强了现有的代码库,并提供了新的工具。最后,我们还提供了新的信息部分,作为我们教育和外联工作的一部分。
Panzea (http://www.panzea.org), the public web site of the project ‘Molecular and Functional Diversity in the Maize Genome’, has expanded over the past two years in data content, display tools and informational sections. The most significant data content expansions occurred for the single nucleotide polymorphism (SNP), sequencing, isozyme and phenotypic data types. We have enhanced our existing web display tools and have launched a number of new tools for data display and analysis. For example, we have implemented one that allows users to find polymorphisms between two accessions, a geographic map tool to visualize the geographic distribution of SNPs, simple sequence repeats (SSRs) and isozyme alleles and a graphical view of the placement of Panzea markers and genes/loci on genetic and physical maps. One goal of the informatics component of our project has been to generate code that can be used by other groups. We have enhanced our existing code base and have made our new tools available. Finally, we have also made available new informational sections as part of our educational and outreach efforts.
DOI: 10.1093/nar/gkl1048
发表时间: 2007-01-01
影响因子: 14.9
作者:
Lawrence, Carolyn J.;Schaeffer, Mary L.;Harper, Lisa C.
通讯作者: Harper, Lisa C.
DOI: 10.1104/pp.103.034538
发表时间: 2004-04-01
期刊: PLANT PHYSIOLOGY
影响因子: 7.4
作者:
Gardiner, J;Schroeder, S;Coe, EH
通讯作者: Coe, EH
DOI: 10.1093/bioinformatics/btl028
发表时间: 2006-04-01
期刊: BIOINFORMATICS
影响因子: 5.8
作者:
Canaran, P;Stein, L;Ware, D
通讯作者: Ware, D
DOI: 10.1093/nar/gkj011
发表时间: 2006-01-01
影响因子: 14.9
作者:
Zhao W;Canaran P;Jurkuta R;Fulton T;Glaubitz J;Buckler E;Doebley J;Gaut B;Goodman M;Holland J;Kresovich S;McMullen M;Stein L;Ware D
通讯作者: Ware D