Four new type I restriction enzymes identified in Escherichia coli clinical isolates.

Four new type I restriction enzymes identified in Escherichia coli clinical isolates.
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DOI:
10.1093/nar/gni114
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发表时间:
2005-07-21
影响因子:
14.9
通讯作者:
Ryu J
Ryu J
中科院分区:
生物学2区
文献类型:
--
作者:
Kasarjian JK;Kodama Y;Iida M;Matsuda K;Ryu J

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采用质粒转化方法和RM搜索计算机程序,从临床分离的大肠杆菌中鉴定出4种具有新识别位点的I型内切酶和2种同分异构体(EcoBI和Eco377I)。这些新酶被命名为Eco394I、Eco826I、Eco851I和Eco912I。它们的识别序列分别为GAC(5N)RTAAY、GCA(6N)CTGA、GTCA(6N)TGAY和CAC(5N)TGGC。甲基化敏感性试验,使用各种合成寡核苷酸,用于鉴定防止切割时甲基化的腺嘌呤(下划线)。这些结果表明I型酶在大肠杆菌和许多其他细菌中丰富,正如从细菌基因组测序项目中推断的那样。
Using a plasmid transformation method and the RM search computer program, four type I restriction enzymes with new recognition sites and two isoschizomers (EcoBI and Eco377I) were identified in a collection of clinical Escherichia coli isolates. These new enzymes were designated Eco394I, Eco826I, Eco851I and Eco912I. Their recognition sequences were determined to be GAC(5N)RTAAY, GCA(6N)CTGA, GTCA(6N)TGAY and CAC(5N)TGGC, respectively. A methylation sensitivity assay, using various synthetic oligonucleotides, was used to identify the adenines that prevent cleavage when methylated (underlined). These results suggest that type I enzymes are abundant in E.coli and many other bacteria, as has been inferred from bacterial genome sequencing projects.
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发表时间: 1989-01-13
期刊: CELL
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