GoMiner: a resource for biological interpretation of genomic and proteomic data.

GoMiner: a resource for biological interpretation of genomic and proteomic data.
复制标题

DOI:
10.1186/gb-2003-4-4-r28
复制
发表时间:
2003
期刊:
影响因子:
12.3
通讯作者:
Weinstein JN
Weinstein JN
中科院分区:
生物学1区
文献类型:
--
作者:
Zeeberg BR;Feng W;Wang G;Wang MD;Fojo AT;Sunshine M;Narasimhan S;Kane DW;Reinhold WC;Lababidi S;Bussey KJ;Riss J;Barrett JC;Weinstein JN

文献摘要

参考文献

被引文献

相似文献

GoMiner是一个程序包,它组织“有趣的”基因列表,以便在基因本体论的背景下进行生物学解释。我们开发了GoMiner,这是一个程序包,用于组织“有趣”基因列表(例如,来自微阵列实验的低表达和过表达基因),以便在基因本体论的背景下进行生物学解释。GoMiner提供了定量和统计输出文件以及两个有用的可视化工具。第一个是类似于AmiGO浏览器的树形结构,第二个是一个紧凑的、动态交互的“有向无环图”。在GoMiner中显示的基因链接到主要的公共生物信息学资源。
GoMiner, a program package that organizes lists of 'interesting' genes for biological interpretation in the context of the Gene Ontology, has been developed. We have developed GoMiner, a program package that organizes lists of 'interesting' genes (for example, under- and overexpressed genes from a microarray experiment) for biological interpretation in the context of the Gene Ontology. GoMiner provides quantitative and statistical output files and two useful visualizations. The first is a tree-like structure analogous to that in the AmiGO browser and the second is a compact, dynamically interactive 'directed acyclic graph'. Genes displayed in GoMiner are linked to major public bioinformatics resources.
DOI: 10.1186/gb-2003-4-1-r7
发表时间: 2003
期刊: Genome biology
影响因子: 12.3
作者:
Doniger SW;Salomonis N;Dahlquist KD;Vranizan K;Lawlor SC;Conklin BR
通讯作者: Conklin BR
DOI: 10.2144/99276bc03
发表时间: 1999-12-01
期刊: BIOTECHNIQUES
影响因子: 2.7
作者:
Tanabe, L;Scherf, U;Weinstein, JN
通讯作者: Weinstein, JN
DOI: 10.1016/s1471-4892(02)00185-6
发表时间: 2002-08-01
影响因子: 4
作者:
Weinstein, JN
通讯作者: Weinstein, JN
DOI: 10.1186/gb-2003-4-4-r27
发表时间: 2003
期刊: GENOME BIOLOGY
影响因子: 12.3
作者:
Bussey, Kimberly J;Kane, David;Sunshine, Margot;Narasimhan, Sudar;Nishizuka, Satoshi;Reinhold, William C;Zeeberg, Barry;Ajay, Weinstein;Weinstein, John N
通讯作者: Weinstein, John N
DOI: 10.1006/geno.2002.6698
发表时间: 2002-02-01
期刊: GENOMICS
影响因子: 4.4
作者:
Khatri, P;Draghici, S;Krawetz, SA
通讯作者: Krawetz, SA