RNA sensor MDA5 suppresses LINE-1 retrotransposition by regulating the promoter activity of LINE-1 5'-UTR.

RNA sensor MDA5 suppresses LINE-1 retrotransposition by regulating the promoter activity of LINE-1 5'-UTR.
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RNA 传感器 MDA5 通过调节 LINE-1 5-UTR 的启动子活性来抑制 LINE-1 逆转录转座

DOI:
10.1186/s13100-022-00268-0
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发表时间:
2022-04-12
期刊:
影响因子:
4.9
通讯作者:
--
中科院分区:
生物学3区
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--
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1型长散布元件,或LINE-1,是唯一在人类细胞中自主复制的逆转录元件。LINE-1的逆转录转座过程可以触发先天免疫系统的激活,并已被提出在几种自身免疫性疾病的发展中发挥作用,包括Aicardi-Goutières综合征(AGS)。相比之下,所有已知的AGS相关蛋白,除了MDA 5,已被报道影响LINE-1的活性。因此,MDA 5也可能作为LINE-1抑制剂发挥作用。在基于荧光素酶的LINE-1逆转录转座试验中发现MDA 5有效抑制LINE-1活性。虽然MDA 5是一种能够激活先天免疫系统的内源性RNA传感器,但干扰素(IFN)表达的增加仅部分有助于MDA 5介导的LINE-1抑制。相反,MDA 5有效地调节LINE-1 5′-UTR的启动子活性,如通过瞬时表达myc-taged MDA 5或敲低内源性MDA 5表达所证实的。因此,MDA 5有效地减少了LINE-1 RNA的产生以及随后LINE-1 ORF 1 p和ORF 2 p的表达。有趣的是,尽管MDA 5是一种多结构域蛋白,但仅N-末端2CARD结构域就足以与LINE-1 5′-UTR相互作用并抑制LINE-1启动子活性。我们的数据表明,MDA 5作为启动子调节剂发挥作用;它直接结合LINE-1 5′-UTR并抑制其启动子活性。因此,MDA 5降低LINE-1 RNA和蛋白水平,并最终抑制LINE-1逆转录转座。相比之下,MDA 5诱导的IFN表达在MDA 5介导的LINE-1抑制中仅起轻微作用。此外,发现N-末端2CARD结构域在抑制LINE-1复制时是MDA 5的功能区域。因此,我们的数据表明,除了作为先天免疫系统的启动子,MDA 5也是针对LINE-1活性的效应子,可能通过抑制LINE-1诱导的先天免疫激活形成反馈环。在线版本包含补充材料,可通过10.1186/s13100-022-00268-0获得。
Type 1 long interspersed elements, or LINE-1, are the only retroelements that replicate autonomously in human cells. The retrotransposition process of LINE-1 can trigger the activation of the innate immune system and has been proposed to play a role in the development of several autoimmune diseases, including Aicardi-Goutières syndrome (AGS). In contrast, all known AGS-associated proteins, except MDA5, have been reported to affect LINE-1 activity. Thus, MDA5 is likely to also function as a LINE-1 suppressor. MDA5 was found to potently suppress LINE-1 activity in a reporter-based LINE-1 retrotransposition assay. Although MDA5 is an endogenous RNA sensor able to activate the innate immune system, increased interferon (IFN) expression only contributed in part to MDA5-mediated LINE-1 suppression. Instead, MDA5 potently regulated the promoter activity of LINE-1 5′-UTR, as confirmed by transiently expressed myc-tagged MDA5 or knockdown of endogenous MDA5 expression. Consequently, MDA5 effectively reduced the generation of LINE-1 RNA and the subsequent expression of LINE-1 ORF1p and ORF2p. Interestingly, despite MDA5 being a multi-domain protein, the N-terminal 2CARD domain alone is sufficient to interact with LINE-1 5′-UTR and inhibit LINE-1 promoter activity. Our data reveal that MDA5 functions as a promoter regulator; it directly binds to the LINE-1 5′-UTR and suppresses its promoter activity. Consequently, MDA5 reduces LINE-1 RNA and protein levels, and ultimately inhibits LINE-1 retrotransposition. In contrast, MDA5-induced IFN expression only plays a mild role in MDA5-mediated LINE-1 suppression. In addition, the N-terminal 2CARD domain was found to be a functional region for MDA5 upon inhibition of LINE-1 replication. Thus, our data suggest that besides being an initiator of the innate immune system, MDA5 is also an effector against LINE-1 activity, potentially forming a feedback loop by suppressing LINE-1-induced innate immune activation. The online version contains supplementary material available at 10.1186/s13100-022-00268-0.
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