A versatile genome-scale PCR-based pipeline for high-definition DNA FISH.

A versatile genome-scale PCR-based pipeline for high-definition DNA FISH.
复制标题

DOI:
10.1038/nmeth.2306
复制
发表时间:
2013-02
期刊:
影响因子:
48
通讯作者:
van Oudenaarden, Alexander
van Oudenaarden, Alexander
中科院分区:
生物学1区
文献类型:
--
作者:
Bienko, Magda;Crosetto, Nicola;Teytelman, Leonid;Klemm, Sandy;Itzkovitz, Shalev;van Oudenaarden, Alexander

文献摘要

参考文献

被引文献

相似文献

我们开发了一种基于基因组规模的高清晰度DNA FISH(HD-FISH)的经济有效的方法。我们通过HD-FISH和单分子RNA FISH相结合的方法,以衍射受限分辨率显示基因位点,染色体作为斑点簇,单基因和转录本一起显示。我们提供了一个超过430万对针对人类和小鼠基因组的数据库,可用于快速灵活地生成探针,使HD-FISH对许多研究和诊断应用具有宝贵的价值。
We have developed a cost-effective genome-scale PCR-based method for high-definition DNA FISH (HD-FISH). We visualized gene loci with diffraction-limited resolution, chromosomes as spot clusters, and single genes together with transcripts by combining HD-FISH with single-molecule RNA FISH. We provide a database of over 4.3 million primer pairs targeting the human and mouse genome readily usable for rapid and flexible generation of probes, making HD-FISH invaluable for many research and diagnostic applications.
DOI: 10.1038/nmeth.1253
发表时间: 2008-10
期刊: NATURE METHODS
影响因子: 48
作者:
Raj, Arjun;van den Bogaard, Patrick;Rifkin, Scott A.;van Oudenaarden, Alexander;Tyagi, Sanjay
通讯作者: Tyagi, Sanjay
DOI: 10.1159/000015390
发表时间: 1999-01-01
期刊: CYTOGENETICS AND CELL GENETICS
影响因子: --
作者:
Wiegant, JCAG;van Gijlswijk, RPM;Tanke, HJ
通讯作者: Tanke, HJ
DOI: 10.1073/pnas.1213818110
发表时间: 2012-12-26
影响因子: 11.1
作者:
Beliveau, Brian J.;Joyce, Eric F.;Wu, Chao-ting
通讯作者: Wu, Chao-ting
DOI: 10.1101/gr.171701
发表时间: 2001-06-01
期刊: GENOME RESEARCH
影响因子: 7
作者:
Rogan, PK;Cazcarro, PM;Knoll, JHM
通讯作者: Knoll, JHM
DOI: 10.1093/bioinformatics/btl273
发表时间: 2006-10-01
期刊: BIOINFORMATICS
影响因子: 5.8
作者:
Navin, Nicholas;Grubor, Vladimir;Wigler, Michael
通讯作者: Wigler, Michael