Big Data: Astronomical or Genomical?

Big Data: Astronomical or Genomical?
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DOI:
10.1371/journal.pbio.1002195
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发表时间:
2015-07
期刊:
影响因子:
9.8
通讯作者:
Robinson GE
Robinson GE
中科院分区:
生物学1区
文献类型:
--
作者:
Stephens ZD;Lee SY;Faghri F;Campbell RH;Zhai C;Efron MJ;Iyer R;Schatz MC;Sinha S;Robinson GE

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基因组学是一门大数据科学,很快就会变得更大,但目前还不知道基因组学的需求是否会超过其他大数据领域。展望到2025年,我们将基因组学与其他三个主要的大数据生成器进行了比较:天文学,YouTube和Twitter。我们的估计表明,基因组学是一个“四头野兽”-它是在数据采集,存储,分发和分析方面与这里分析的领域相媲美或要求最高。我们讨论了新技术的各个方面,这些技术将需要发展起来,以应对基因组学在不久的将来带来的计算挑战。现在是为下一个十年的“基因组”挑战进行协调一致的社区范围规划的时候了。这个观点考虑了基因组学在未来十年的增长,并评估了我们将面临的相对于其他“大数据”活动(如天文学,YouTube和Twitter)的计算需求。
Genomics is a Big Data science and is going to get much bigger, very soon, but it is not known whether the needs of genomics will exceed other Big Data domains. Projecting to the year 2025, we compared genomics with three other major generators of Big Data: astronomy, YouTube, and Twitter. Our estimates show that genomics is a “four-headed beast”—it is either on par with or the most demanding of the domains analyzed here in terms of data acquisition, storage, distribution, and analysis. We discuss aspects of new technologies that will need to be developed to rise up and meet the computational challenges that genomics poses for the near future. Now is the time for concerted, community-wide planning for the “genomical” challenges of the next decade. This perspective considers the growth of genomics over the next ten years and assesses the computational needs that we will face relative to other "Big Data" activities such as astronomy, YouTube, and Twitter.
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