MyoD is a 3D genome structure organizer for muscle cell identity.
MyoD is a 3D genome structure organizer for muscle cell identity.
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MyoD 是用于肌肉细胞识别的 3D 基因组结构组织者
DOI：
10.1038/s41467-021-27865-6
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发表时间：
2022-01-11
影响因子：
16.6
通讯作者：
Zhu D
中科院分区：
文献类型：
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作者：
Wang R;Chen F;Chen Q;Wan X;Shi M;Chen AK;Ma Z;Li G;Wang M;Ying Y;Liu Q;Li H;Zhang X;Ma J;Zhong J;Chen M;Zhang MQ;Zhang Y;Chen Y;Zhu D
The genome exists as an organized, three-dimensional (3D) dynamic architecture, and each cell type has a unique 3D genome organization that determines its cell identity. An unresolved question is how cell type-specific 3D genome structures are established during development. Here, we analyzed 3D genome structures in muscle cells from mice lacking the muscle lineage transcription factor (TF), MyoD, versus wild-type mice. We show that MyoD functions as a “genome organizer” that specifies 3D genome architecture unique to muscle cell development, and that H3K27ac is insufficient for the establishment of MyoD-induced chromatin loops in muscle cells. Moreover, we present evidence that other cell lineage-specific TFs might also exert functional roles in orchestrating lineage-specific 3D genome organization during development.
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DOI：
10.1093/bioinformatics/btu638
发表时间：
2015-01-15
期刊：
Bioinformatics (Oxford, England)
影响因子：
--
作者：
Anders S;Pyl PT;Huber W
通讯作者：
Huber W
相位分离驱动异常的染色质循环和癌症发展。
影响因子：
64.8
作者：
Ahn JH;Davis ES;Daugird TA;Zhao S;Quiroga IY;Uryu H;Li J;Storey AJ;Tsai YH;Keeley DP;Mackintosh SG;Edmondson RD;Byrum SD;Cai L;Tackett AJ;Zheng D;Legant WR;Phanstiel DH;Wang GG
通讯作者：
Wang GG
影响因子：
23.9
作者：
Guenther, Stefan;Kim, Johnny;Kostin, Sawa;Lepper, Christoph;Fan, Chen-Ming;Braun, Thomas
通讯作者：
Braun, Thomas
影响因子：
64.8
作者：
Dixon JR;Jung I;Selvaraj S;Shen Y;Antosiewicz-Bourget JE;Lee AY;Ye Z;Kim A;Rajagopal N;Xie W;Diao Y;Liang J;Zhao H;Lobanenkov VV;Ecker JR;Thomson JA;Ren B
通讯作者：
Ren B
影响因子：
--
作者：
Bayani, Jane;Squire, Jeremy A
通讯作者：
Squire, Jeremy A