High throughput sequencing of in vitro selections of mRNA-displayed peptides: data analysis and applications.

High throughput sequencing of in vitro selections of mRNA-displayed peptides: data analysis and applications.
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体外选择mRNA脱离肽的高吞吐量测序:数据分析和应用。

DOI:
10.1039/c9cp05912a
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发表时间:
2020-03-28
期刊:
Physical chemistry chemical physics : PCCP
影响因子:
--
通讯作者:
Chen IA
Chen IA
中科院分区:
其他
文献类型:
--
作者:
Blanco C ;Verbanic S ;Seelig B ;Chen IA

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使用 mRNA 展示的体外选择是目前广泛使用的分离具有所需特性的功能肽的方法。对体外进化实验的高通量测序 (HTS) 数据进行分析已被证明是一项强大的技术,但直到最近才将其应用于 mRNA 展示选择。在这篇文章中,我们介绍了物理化学家可能感兴趣的 mRNA 展示和 HTS 方面。我们强调了 HTS 分析体外肽选择的潜力,并回顾了 HTS 分析在 mRNA 展示实验中应用的最新进展。我们讨论了高温超导分析中可能出现的一些问题,并总结了一些缓解这些问题的策略。最后,讨论了先进的 HTS 分析对 mRNA 展示实验的未来影响的潜力。 mRNA 高通量测序 (HTS) 显示功能肽的选择
In vitro selection using mRNA display is currently a widely used method to isolate functional peptides with desired properties. The analysis of High Throughput Sequencing (HTS) data from in vitro evolution experiments has proven to be a powerful technique but only recently has it been applied to mRNA display selections. In this Perspective, we introduce aspects of mRNA display and HTS that may be of interest to physical chemists. We highlight the potential of HTS to analyze in vitro selections of peptides and review recent advances in the application of HTS analysis to mRNA display experiments. We discuss some possible issues involved with HTS analysis and summarize some strategies to alleviate them. Finally, the potential for future impact of advancing HTS analysis on mRNA display experiments is discussed. High-throughput sequencing (HTS) of mRNA display selection of functional peptides
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