Toward design-based engineering of industrial microbes.

Toward design-based engineering of industrial microbes.
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DOI:
10.1016/j.mib.2010.02.001
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发表时间:
2010-06
影响因子:
5.4
通讯作者:
Nielsen, Jens
Nielsen, Jens
中科院分区:
生物学2区
文献类型:
--
作者:
Tyo, Keith E. J.;Kocharin, Kanokarn;Nielsen, Jens

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由于细胞生物学知识的不完善,工业微生物工程一直受到阻碍。因此,建模、实现和分析的迭代工程周期已被用于在实现工程目标的同时增加对潜在生物学的知识。系统生物学技术的最新进展极大地提高了每次迭代中可以收集的信息量。同样,合成生物学工具正在融合建模和分子实现。这些进步有望将微生物工程从迭代方法转移到面向设计的范式,类似于电路和建筑设计。基因组尺度代谢模型、控制表达的新工具和集成组学分析被描述为将该领域推向基于设计的工程的关键贡献者。
Engineering industrial microbes has been hampered by incomplete knowledge of cell biology. Thus an iterative engineering cycle of modeling, implementation, and analysis has been used to increase knowledge of the underlying biology while achieving engineering goals. Recent advances in systems biology technologies have drastically improved the amount of information that can be collected in each iteration. As well, synthetic biology tools are melding modeling and molecular implementation. These advances promise to move microbial engineering from the iterative approach to a design-oriented paradigm, similar to electrical circuits and architectural design. Genome scale metabolic models, new tools for controlling expression, and integrated –omics analysis are described as key contributors in moving the field toward design-based engineering.
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