The use of a single pseudo-sample in approximate Bayesian computation

The use of a single pseudo-sample in approximate Bayesian computation
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在近似贝叶斯计算中使用单个伪样本

DOI:
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发表时间:
2014
影响因子:
2.2
通讯作者:
D. Woodard
D. Woodard
中科院分区:
数学2区
文献类型:
--
作者:
L. Bornn;N. Pillai;Aaron Smith;D. Woodard

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我们分析了近似贝叶斯计算(ABC)的计算效率,它近似的似然函数从相关的模型中绘制伪样本。对于ABC的拒绝采样版本,已知与采用基于单个伪样本的高方差估计相比,多个伪样本不能显著增加(并且可以显著降低)算法的效率。我们表明,这一结论也适用于马尔可夫链蒙特卡罗版本的ABC,这意味着它是不必要的调整伪样本的数量在ABC-MCMC中使用。这一结论与粒子MCMC方法相反,对于粒子MCMC方法,增加粒子的数量可以在计算效率上提供很大的增益。
We analyze the computational efficiency of approximate Bayesian computation (ABC), which approximates a likelihood function by drawing pseudo-samples from the associated model. For the rejection sampling version of ABC, it is known that multiple pseudo-samples cannot substantially increase (and can substantially decrease) the efficiency of the algorithm as compared to employing a high-variance estimate based on a single pseudo-sample. We show that this conclusion also holds for a Markov chain Monte Carlo version of ABC, implying that it is unnecessary to tune the number of pseudo-samples used in ABC-MCMC. This conclusion is in contrast to particle MCMC methods, for which increasing the number of particles can provide large gains in computational efficiency.
伪边际马尔可夫链蒙特卡罗算法的收敛性
DOI: 10.1214/14-aap1022
发表时间: 2015
期刊: The Annals of Applied Probability
影响因子: --
作者:
Andrieu C
通讯作者: Andrieu C
DOI: 10.1214/15-aap1158
发表时间: 2014-04
影响因子: 1.8
作者:
C. Andrieu;M. Vihola
通讯作者: C. Andrieu;M. Vihola
DOI: 10.1093/oxfordjournals.molbev.a026091
发表时间: 1999-12-01
影响因子: 10.7
作者:
Pritchard, JK;Seielstad, MT;Feldman, MW
通讯作者: Feldman, MW