Fundamentals of microbial community resistance and resilience.
Fundamentals of microbial community resistance and resilience.
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DOI：
10.3389/fmicb.2012.00417
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发表时间：
2012
影响因子：
5.2
通讯作者：
Handelsman J
中科院分区：
文献类型：
--
作者：
Shade A;Peter H;Allison SD;Baho DL;Berga M;Bürgmann H;Huber DH;Langenheder S;Lennon JT;Martiny JB;Matulich KL;Schmidt TM;Handelsman J
微生物群落是所有生态系统的核心，但在扰动环境中的微生物群落行为仍然难以测量和预测。了解微生物群落稳定性的驱动因素，包括抵抗力（对干扰不敏感）和恢复力（干扰后的恢复速度），对于预测群落对干扰的反应非常重要。在这里，我们概述了与微生物群落相关的稳定性概念。首先，我们强调了生态学的见解，这些见解对定义和测量稳定性很有用。为了确定是否存在一般的干扰反应的微生物群落，我们接下来检查有代表性的研究文献，调查社区的反应，以新闻（长期）和脉冲（短期）在各种栖息地的干扰。然后，我们讨论了微生物个体、微生物种群和微生物群落的生物学特征，这些生物学特征可能决定着整个群落的稳定性。我们的结论与思想的独特见解，系统的观点-告知元组学数据-可能提供有关微生物群落稳定性。
Microbial communities are at the heart of all ecosystems, and yet microbial community behavior in disturbed environments remains difficult to measure and predict. Understanding the drivers of microbial community stability, including resistance (insensitivity to disturbance) and resilience (the rate of recovery after disturbance) is important for predicting community response to disturbance. Here, we provide an overview of the concepts of stability that are relevant for microbial communities. First, we highlight insights from ecology that are useful for defining and measuring stability. To determine whether general disturbance responses exist for microbial communities, we next examine representative studies from the literature that investigated community responses to press (long-term) and pulse (short-term) disturbances in a variety of habitats. Then we discuss the biological features of individual microorganisms, of microbial populations, and of microbial communities that may govern overall community stability. We conclude with thoughts about the unique insights that systems perspectives – informed by meta-omics data – may provide about microbial community stability.
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DOI：
10.1126/science.1224203
发表时间：
2012-06-08
期刊：
Science (New York, N.Y.)
影响因子：
--
作者：
Costello EK;Stagaman K;Dethlefsen L;Bohannan BJ;Relman DA
通讯作者：
Relman DA
影响因子：
16.8
作者：
Bond, WJ;Midgley, JJ
通讯作者：
Midgley, JJ
影响因子：
8.8
作者：
Carpenter, SR;Brock, WA
通讯作者：
Brock, WA
影响因子：
11
作者：
Barberan, Albert;Bates, Scott T.;Fierer, Noah
通讯作者：
Fierer, Noah
影响因子：
15.9
作者：
Britton, Robert A.;Young, Vincent B.
通讯作者：
Young, Vincent B.