Corrigendum: Minimum information about a single amplified genome (MISAG) and a metagenome-assembled genome (MIMAG) of bacteria and archaea.

Corrigendum: Minimum information about a single amplified genome (MISAG) and a metagenome-assembled genome (MIMAG) of bacteria and archaea.
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CRRIGENDUM:有关单个扩增基因组(Misag)和细菌和古细菌的元基因组组装基因组(MIMAG)的最低信息。

DOI:
10.1038/nbt0218-196a
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发表时间:
2018-02-06
影响因子:
46.9
通讯作者:
Woyke T
Woyke T
中科院分区:
工程技术1区
文献类型:
--
作者:
Bowers RM;Kyrpides NC;Stepanauskas R;Harmon-Smith M;Doud D;Reddy TBK;Schulz F;Jarett J;Rivers AR;Eloe-Fadrosh EA;Tringe SG;Ivanova NN;Copeland A;Clum A;Becraft ED;Malmstrom RR;Birren B;Podar M;Bork P;Weinstock GM;Garrity GM;Dodsworth JA;Yooseph S;Sutton G;Glöckner FO;Gilbert JA;Nelson WC;Hallam SJ;Jungbluth SP;Ettema TJG;Tighe S;Konstantinidis KT;Liu WT;Baker BJ;Rattei T;Eisen JA;Hedlund B;McMahon KD;Fierer N;Knight R;Finn R;Cochrane G;Karsch-Mizrachi I;Tyson GW;Rinke C;Genome Standards Consortium;Lapidus A;Meyer F;Yilmaz P;Parks DH;Eren AM;Schriml L;Banfield JF;Hugenholtz P;Woyke T

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我们提出了基因组标准联盟(GSC)为报告细菌和古细菌基因组序列制定的两个标准。两者都是关于任意(x)序列的最小信息(MIxS)的扩展。标准是关于单个扩增基因组的最小信息(MISAG)和关于宏基因组组装基因组的最小信息(MIMAG),包括但不限于组装质量,基因组完整性和污染的估计。这些标准可与其他GSC核对表结合使用,包括基因组序列最小信息(MIGS)、宏基因组序列最小信息(MIMS)和标记基因序列最小信息(MIMARKS)。在社区范围内采用MISAG和MIMAG将有助于对细菌和古细菌多样性进行更有力的比较基因组分析。
We present two standards developed by the Genomic Standards Consortium (GSC) for reporting bacterial and archaeal genome sequences. Both are extensions of the Minimum Information about Any (x) Sequence (MIxS). The standards are the Minimum Information about a Single Amplified Genome (MISAG) and the Minimum Information about a Metagenome-Assembled Genome (MIMAG), including, but not limited to, assembly quality, and estimates of genome completeness and contamination. These standards can be used in combination with other GSC checklists, including the Minimum Information about a Genome Sequence (MIGS), Minimum Information about a Metagenomic Sequence (MIMS), and Minimum Information about a Marker Gene Sequence (MIMARKS). Community-wide adoption of MISAG and MIMAG will facilitate more robust comparative genomic analyses of bacterial and archaeal diversity.
DOI: 10.1038/nbt.3893
发表时间: 2017-08-08
影响因子: 46.9
作者:
Bowers RM;Kyrpides NC;Stepanauskas R;Harmon-Smith M;Doud D;Reddy TBK;Schulz F;Jarett J;Rivers AR;Eloe-Fadrosh EA;Tringe SG;Ivanova NN;Copeland A;Clum A;Becraft ED;Malmstrom RR;Birren B;Podar M;Bork P;Weinstock GM;Garrity GM;Dodsworth JA;Yooseph S;Sutton G;Glöckner FO;Gilbert JA;Nelson WC;Hallam SJ;Jungbluth SP;Ettema TJG;Tighe S;Konstantinidis KT;Liu WT;Baker BJ;Rattei T;Eisen JA;Hedlund B;McMahon KD;Fierer N;Knight R;Finn R;Cochrane G;Karsch-Mizrachi I;Tyson GW;Rinke C;Genome Standards Consortium;Lapidus A;Meyer F;Yilmaz P;Parks DH;Eren AM;Schriml L;Banfield JF;Hugenholtz P;Woyke T
通讯作者: Woyke T