Potentials 'R' Us web-server for protein energy estimations with coarse-grained knowledge-based potentials.
Potentials 'R' Us web-server for protein energy estimations with coarse-grained knowledge-based potentials.
复制标题
电位“ R”美国网络服务器，用于具有基于粗粒知识的潜力的蛋白质能量估计。
DOI：
10.1186/1471-2105-11-92
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发表时间：
2010-02-17
影响因子：
3
通讯作者：
Jernigan RL
中科院分区：
文献类型：
--
作者：
Feng Y;Kloczkowski A;Jernigan RL
Knowledge-based potentials have been widely used in the last 20 years for fold recognition, protein structure prediction from amino acid sequence, ligand binding, protein design, and many other purposes. However generally these are not readily accessible online. Our new knowledge-based potential server makes available many of these potentials for easy use to automatically compute the energies of protein structures or models supplied. Our web server for protein energy estimation uses four-body potentials, short-range potentials, and 23 different two-body potentials. Users can select potentials according to their needs and preferences. Files containing the coordinates of protein atoms in the PDB format can be uploaded as input. The results will be returned to the user's email address. Our Potentials 'R'Us server is an easily accessible, freely available tool with a web interface that collects all existing and future protein coarse-grained potentials and computes energies of multiple structural models.
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影响因子：
5.6
作者：
Panchenko, AR;Marchler-Bauer, A;Bryant, SH
通讯作者：
Bryant, SH
影响因子：
8
作者：
Samudrala, R;Levitt, M
通讯作者：
Levitt, M
DOI：
10.1073/pnas.041609598
发表时间：
2001-02-27
影响因子：
11.1
作者：
Pillardy, A;Czaplewski, C;Scheraga, HA
通讯作者：
Scheraga, HA
影响因子：
2.9
作者：
Pokarowski, P;Kloczkowski, A;Kolinski, A
通讯作者：
Kolinski, A
影响因子：
5.5
作者：
MIYAZAWA, S;JERNIGAN, RL
通讯作者：
JERNIGAN, RL