The complete chloroplast genome sequence of Oryza sativa Temperate japonica.

The complete chloroplast genome sequence of Oryza sativa Temperate japonica.
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温带粳稻叶绿体基因组全序列

DOI:
10.1080/23802359.2021.1888331
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发表时间:
2021-03-16
期刊:
Mitochondrial DNA. Part B, Resources
影响因子:
--
通讯作者:
Shi C
Shi C
中科院分区:
其他
文献类型:
--
作者:
Feng Q;Song WC;Zhang YJ;Shi C

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本研究利用Illumina测序数据组装了温带野生稻云京-24的完整叶绿体基因组。叶绿体基因组全长134,556 ,包括一对反向重复序列(irA和irb),长度分别为20,797 ,80,615 和12,347 。共预测129个基因,包括87个蛋白质编码基因、37个tRNA基因和8个rRNA基因。系统发育分析证实了温带野生稻与其他代表性物种的亲缘关系。
In this study, the complete chloroplast genome of O. sativa Temperate Japonica YunJing-24 was assembled using Illumina sequencing data. The complete chloroplast (cp) genome is 134,556 bp in length, including a pair of invert repeats (IRA and IRB) regions of 20,797 bp, large single-copy (LSC) region of 80,615 bp, and small single-copy (SSC) region of 12,347 bp. A total of 129 genes were predicted in the genome, including 87 protein-coding genes, 37 tRNA genes, and 8 rRNA genes. Phylogenetic analysis confirmed the phylogenetic relationship between O. sativa Temperate Japonica and other representative species.
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