OpenBiodiv-O: ontology of the OpenBiodiv knowledge management system

OpenBiodiv-O: ontology of the OpenBiodiv knowledge management system
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OpenBiodiv-O:OpenBiodiv 知识管理系统本体

DOI:
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发表时间:
2018
影响因子:
1.9
通讯作者:
L. Penev
L. Penev
中科院分区:
工程技术4区
文献类型:
--
作者:
Viktor Senderov;K. Simov;N. Franz;P. Stoev;Terry Catapano;D. Agosti;Guido Sautter;R. Morris;L. Penev

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生物多样性领域,特别是生物分类学,正朝着研究成果语义化的方向发展。本工作介绍了OpenBiodiv- o本体,作为OpenBiodiv知识管理系统的基础。我们的目的是提供一个本体,填补生物多样性资源本体之间的空白,如基于达尔文核心的本体,和语义发布本体,如SPAR本体。我们通过提供专注于生物分类学的本体来弥补这一差距。OpenBiodiv-O介绍了学术生物多样性出版和生物分类学领域的类、属性和公理,并将它们与几个重要的领域本体(FaBiO, DoCO, DwC, Darwin-SW, NOMEN, ENVO)对齐。通过这样做,它弥合了学术生物多样性出版和生物分类学之间的本体论差距,并允许创建生物多样性信息的链接开放数据集(LOD)(生物多样性知识图),并使创建开放生物多样性知识管理系统成为可能。本体论的一个关键特征是它是生物分类学科学过程的本体论,而不是任何特定的知识状态的本体论。这一特点使它能够表达多种科学观点。由此产生的OpenBiodiv知识系统可能会获得科学界的高度信任,因为它不会将科学观点强加给用户(例如,执业分类学家,图书馆研究人员等),而是为专家提供工具,以便随着科学的进步对不同的观点进行编码。OpenBiodiv-O提供了生物多样性出版物结构和相关分类学概念发展的概念模型。它也是开放生物多样性知识管理系统的基础。
The biodiversity domain, and in particular biological taxonomy, is moving in the direction of semantization of its research outputs. The present work introduces OpenBiodiv-O, the ontology that serves as the basis of the OpenBiodiv Knowledge Management System. Our intent is to provide an ontology that fills the gaps between ontologies for biodiversity resources, such as DarwinCore-based ontologies, and semantic publishing ontologies, such as the SPAR Ontologies. We bridge this gap by providing an ontology focusing on biological taxonomy. OpenBiodiv-O introduces classes, properties, and axioms in the domains of scholarly biodiversity publishing and biological taxonomy and aligns them with several important domain ontologies (FaBiO, DoCO, DwC, Darwin-SW, NOMEN, ENVO). By doing so, it bridges the ontological gap across scholarly biodiversity publishing and biological taxonomy and allows for the creation of a Linked Open Dataset (LOD) of biodiversity information (a biodiversity knowledge graph) and enables the creation of the OpenBiodiv Knowledge Management System. A key feature of the ontology is that it is an ontology of the scientific process of biological taxonomy and not of any particular state of knowledge. This feature allows it to express a multiplicity of scientific opinions. The resulting OpenBiodiv knowledge system may gain a high level of trust in the scientific community as it does not force a scientific opinion on its users (e.g. practicing taxonomists, library researchers, etc.), but rather provides the tools for experts to encode different views as science progresses. OpenBiodiv-O provides a conceptual model of the structure of a biodiversity publication and the development of related taxonomic concepts. It also serves as the basis for the OpenBiodiv Knowledge Management System.
DOI: 10.1016/j.websem.2012.08.001
发表时间: 2012-12-01
影响因子: 2.5
作者:
Peroni, Silvio;Shotton, David
通讯作者: Shotton, David