VennDiagram: a package for the generation of highly-customizable Venn and Euler diagrams in R.

VennDiagram: a package for the generation of highly-customizable Venn and Euler diagrams in R.
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DOI:
10.1186/1471-2105-12-35
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发表时间:
2011-01-26
期刊:
影响因子:
3
通讯作者:
Boutros PC
Boutros PC
中科院分区:
生物学4区
文献类型:
--
作者:
Chen H;Boutros PC

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正交(不相交)或重叠数据集的可视化是生物信息学中的一项常见任务。在R统计环境中,很少有工具可以自动生成可广泛定制的高分辨率维恩图和欧拉图。为了填补这一空白,我们引入了VennDiagram,这是一个R软件包,可以自动生成高度可定制的高分辨率Venn图(最多四组)和Euler图(最多三组)。VennDiagram包为用户提供了自定义生成的图表的所有方面的能力,包括字体大小,标签样式和位置,以及图表的整体旋转。我们已经实现了缩放的维恩图和欧拉图,这增加了图形的准确性和视觉吸引力。图表生成为高清TIFF文件,简化了创建出版质量图的过程,并简化了与已建立的分析管道的集成。VennDiagram包允许在R统计环境中创建高质量的Venn和Euler图。
Visualization of orthogonal (disjoint) or overlapping datasets is a common task in bioinformatics. Few tools exist to automate the generation of extensively-customizable, high-resolution Venn and Euler diagrams in the R statistical environment. To fill this gap we introduce VennDiagram, an R package that enables the automated generation of highly-customizable, high-resolution Venn diagrams with up to four sets and Euler diagrams with up to three sets. The VennDiagram package offers the user the ability to customize essentially all aspects of the generated diagrams, including font sizes, label styles and locations, and the overall rotation of the diagram. We have implemented scaled Venn and Euler diagrams, which increase graphical accuracy and visual appeal. Diagrams are generated as high-definition TIFF files, simplifying the process of creating publication-quality figures and easing integration with established analysis pipelines. The VennDiagram package allows the creation of high quality Venn and Euler diagrams in the R statistical environment.
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