The NCBI Taxonomy database.

The NCBI Taxonomy database.
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DOI:
10.1093/nar/gkr1178
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发表时间:
2012-01
影响因子:
14.9
通讯作者:
Federhen S
Federhen S
中科院分区:
生物学2区
文献类型:
--
作者:
Federhen S

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NCBI Taxonomy数据库(http://www.ncbi.nlm.nih.gov/taxonomy)是国际核苷酸序列数据库协作组(INSDC)的标准命名和分类库,包括GenBank、ENA(EMBL)和DDBJ数据库。它包括生物体名称和分类谱系的每一个序列中所代表的INSDC的核苷酸和蛋白质序列数据库。分类学数据库由NCBI的一小群科学家手动管理,他们使用当前的分类学文献来维护序列数据库中代表的源生物的系统发育分类。分类学数据库是NCBI上许多资源的中央组织枢纽,并提供了一种方法,用于在NCBI网站的其他域中聚类元素,用于在NCBI系统的域之间进行内部链接,以及用于链接到Web上的分类学特定的外部资源。我们的主要目的是为我们的用户社区尽可能方便地索引序列域。
The NCBI Taxonomy database (http://www.ncbi.nlm.nih.gov/taxonomy) is the standard nomenclature and classification repository for the International Nucleotide Sequence Database Collaboration (INSDC), comprising the GenBank, ENA (EMBL) and DDBJ databases. It includes organism names and taxonomic lineages for each of the sequences represented in the INSDC’s nucleotide and protein sequence databases. The taxonomy database is manually curated by a small group of scientists at the NCBI who use the current taxonomic literature to maintain a phylogenetic taxonomy for the source organisms represented in the sequence databases. The taxonomy database is a central organizing hub for many of the resources at the NCBI, and provides a means for clustering elements within other domains of NCBI web site, for internal linking between domains of the Entrez system and for linking out to taxon-specific external resources on the web. Our primary purpose is to index the domain of sequences as conveniently as possible for our user community.
DOI: 10.1098/rsbl.2003.0025
发表时间: 2003-08-07
影响因子: 4.7
作者:
Hebert, PDN;Ratnasingham, S;deWaard, JR
通讯作者: deWaard, JR
DOI: 10.1093/nar/19.suppl.2247
发表时间: 1991-04-25
影响因子: 14.9
作者:
BAIROCH, A;BOECKMANN, B
通讯作者: BOECKMANN, B
DOI: 10.1093/nar/19.suppl.2231
发表时间: 1991-04-25
影响因子: 14.9
作者:
BARKER, WC;GEORGE, DG;GARAVELLI, JS
通讯作者: GARAVELLI, JS
DOI: 10.3897/phytokeys.5.1850
发表时间: 2011-01-01
期刊: PHYTOKEYS
影响因子: 1.4
作者:
Miller, James S.;Funk, Vicki A.;Herendeen, Patrick
通讯作者: Herendeen, Patrick