IMAS: The Interactive Multigenomic Analysis System

IMAS: The Interactive Multigenomic Analysis System
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IMAS:交互式多基因组分析系统

DOI:
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发表时间:
2007
期刊:
2007 IEEE Symposium on Visual Analytics Science and Technology
影响因子:
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通讯作者:
M. Eremeeva
M. Eremeeva
中科院分区:
--
文献类型:
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作者:
C. Shaw;G. Dasch;M. Eremeeva

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本文介绍了一种新的可视化分析工具IMAS(交互式多基因组分析系统),它将Glimmer、BLAST和Clustal-W等常用分析工具组合成一个统一的可视化分析框架。 IMAS 以高度互动、可缩放的视觉显示方式显示生物学家正在分析的主要 DNA 序列。用户可以通过多种方式分析序列,并以连贯的、序列比对的形式可视化这些分析,并将所有相关的分析产品分组在一起。这使得用户能够快速执行 DNA 序列分析,而无需像现在常见的做法那样,从文本文件到基于网络的数据库和数据分析服务进行繁琐且容易出错的剪切和粘贴序列数据。
This paper introduces a new Visual Analysis tool named IMAS (Interactive Multigenomic Analysis System), which combines common analysis tools such as Glimmer, BLAST, and Clustal-W into a unified Visual Analytic framework. IMAS displays the primary DNA sequence being analyzed by the biologist in a highly interactive, zoomable visual display. The user may analyze the sequence in a number of ways, and visualize these analyses in a coherent, sequence aligned form, with all related analysis products grouped together. This enables the user to rapidly perform analyses of DNA sequences without the need for tedious and error-prone cutting and pasting of sequence data from text files to and from web-based databases and data analysis services, as is now common practice.
DOI: 10.1093/nar/27.23.4636
发表时间: 1999-12-01
影响因子: 14.9
作者:
Delcher, AL;Harmon, D;Salzberg, SL
通讯作者: Salzberg, SL