SCOPE: A Scientific Compound Object Publishing and Editing System

SCOPE: A Scientific Compound Object Publishing and Editing System
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SCOPE:科学复合对象发布和编辑系统

DOI:
10.2218/ijdc.v3i2.55
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发表时间:
2008
期刊:
Int. J. Digit. Curation
影响因子:
--
通讯作者:
J. Drennan
J. Drennan
中科院分区:
--
文献类型:
--
作者:
Kwok Cheung;J. Hunter;A. Lashtabeg;J. Drennan

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本文介绍了SCOPE(科学复合对象出版与编辑)系统,该系统旨在使科学家能够方便地创作、出版和编辑科学复合对象。科学复合对象使科学家能够将在科学实验或发现过程中生成或使用的各种数据集和资源封装在单个复合对象中,以供发布和交换。采用“命名图”来表示这些复合对象,可以通过组件之间的类型化关系来捕获起源信息。这种方法也得到了OAI-ORE倡议的认可,因此确保我们生成符合OAI-ORE的科学复合对象。SCOPE系统是起源资源管理器工具的扩展-它可以访问控制查看科学起源路径。Provenance Explorer提供了科学发现过程的RDF图的动态渲染,显示了从原始数据到出版物的谱系。不同粒度的视图可以使用SWRL(语义Web规则语言)规则和推理引擎自动推断。SCOPE通过以下方式扩展了Provenance Explorer工具和GUI:1)添加了一个嵌入式Web浏览器,可用于合并可通过Web共享的对象; 2)将复合对象表示为命名图,可以保存在RDF,TriX,TriG或Atom聚合提要中; 3)使科学家能够将Creative Commons Licenses附加到复合对象,以指定如何重新使用它们; 4)允许在Fedora数字图书馆中将复合对象发布为Fedora对象XML(FOXML)文件。
This paper presents the SCOPE (Scientific Compound Object Publishing and Editing) system which is designed to enable scientists to easily author, publish and edit scientific compound objects. Scientific compound objects enable scientists to encapsulate the various datasets and resources generated or utilized during a scientific experiment or discovery process, within a single compound object, for publishing and exchange. The adoption of “named graphs” to represent these compound objects enables provenance information to be captured via the typed relationships between the components. This approach is also endorsed by the OAI-ORE initiative and hence ensures that we generate OAI-ORE-compliant Scientific Compound Objects. The SCOPE system is an extension of the Provenance Explorer tool – which enables access-controlled viewing of scientific provenance trails. Provenance Explorer provided dynamic rendering of RDF graphs of scientific discovery processes, showing the lineage from raw data to publication. Views of different granularity can be inferred automatically using SWRL (Semantic Web Rules Language) rules and an inferencing engine. SCOPE extends the Provenance Explorer tool and GUI by: 1) Adding an embedded web browser that can be used for incorporating objects discoverable via the Web; 2) Representing compound objects as Named Graphs, that can be saved in RDF, TriX, TriG or as an Atom syndication feed; 3) Enabling scientists to attach Creative Commons Licenses to the compound objects to specify how they may be re-used; 4) Enabling compound objects to be published as Fedora Object XML (FOXML) files within a Fedora digital library.
DOI: 10.1093/nar/gkg095
发表时间: 2003-01-01
影响因子: 14.9
作者:
Boeckmann, B;Bairoch, A;Schneider, M
通讯作者: Schneider, M