Whole Transcriptome Profiling: An RNA-Seq Primer and Implications for Pharmacogenomics Research.

Whole Transcriptome Profiling: An RNA-Seq Primer and Implications for Pharmacogenomics Research.
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DOI:
10.1111/cts.12511
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发表时间:
2018-03
期刊:
Clinical and translational science
影响因子:
--
通讯作者:
Johnson JA
Johnson JA
中科院分区:
其他
文献类型:
--
作者:
Sá ACC;Sadee W;Johnson JA

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药物基因组学揭示了与药物反应变异性相关的引人注目的遗传信号。基因表达研究代表了鉴定解释药物反应变异性的候选基因的另一种方法。这篇评论的重点是通过分析转录组来揭示基因表达对可变药物反应的影响。我们提供了RNA测序(RNA-Seq)及其应用的基本概述,并概述了RNA-Seq数据在药物基因组学方面的进展。
Pharmacogenomics has revealed compelling genetic signals associated with variability in drug response. Gene expression studies represent an additional approach to identify candidate genes accounting for drug response variability. This review focuses on insights that might be gained through analysis of the transcriptome to reveal the influence of gene expression on variable drug response. We provide a basic overview of RNA-Sequencing (RNA-Seq) and its applications, and outline advances in pharmacogenomics achievable with RNA-Seq data.
DOI: 10.1038/nature10405
发表时间: 2011-09-11
期刊: NATURE
影响因子: 64.8
作者:
Ehret, Georg B.;Munroe, Patricia B.;Rice, Kenneth M.;Bochud, Murielle;Johnson, Andrew D.;Chasman, Daniel I.;Smith, Albert V.;Tobin, Martin D.;Verwoert, Germaine C.;Hwang, Shih-Jen;Pihur, Vasyl;Vollenweider, Peter;O'Reilly, Paul F.;Amin, Najaf;Bragg-Gresham, Jennifer L.;Teumer, Alexander;Glazer, Nicole L.;Launer, Lenore;Zhao, Jing Hua;Aulchenko, Yurii;Heath, Simon;Sober, Siim;Parsa, Afshin;Luan, Jian'an;Arora, Pankaj;Dehghan, Abbas;Zhang, Feng;Lucas, Gavin;Hicks, Andrew A.;Jackson, Anne U.;Peden, John F.;Tanaka, Toshiko;Wild, Sarah H.;Rudan, Igor;Igl, Wilmar;Milaneschi, Yuri;Parker, Alex N.;Fava, Cristiano;Chambers, John C.;Fox, Ervin R.;Kumari, Meena;Go, Min Jin;van der Harst, Pim;Kao, Wen Hong Linda;Sjogren, Marketa;Vinay, D. G.;Alexander, Myriam;Tabara, Yasuharu;Shaw-Hawkins, Sue;Whincup, Peter H.;Liu, Yongmei;Shi, Gang;Kuusisto, Johanna;Tayo, Bamidele;Seielstad, Mark;Sim, Xueling;Khanh-Dung Hoang Nguyen;Lehtimaki, Terho;Matullo, Giuseppe;Wu, Ying;Gaunt, Tom R.;Onland-Moret, N. 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通讯作者: Johnson, Toby
DOI: 10.1371/journal.pgen.1001393
发表时间: 2011-06
期刊: PLoS genetics
影响因子: 4.5
作者:
Ghazalpour A;Bennett B;Petyuk VA;Orozco L;Hagopian R;Mungrue IN;Farber CR;Sinsheimer J;Kang HM;Furlotte N;Park CC;Wen PZ;Brewer H;Weitz K;Camp DG 2nd;Pan C;Yordanova R;Neuhaus I;Tilford C;Siemers N;Gargalovic P;Eskin E;Kirchgessner T;Smith DJ;Smith RD;Lusis AJ
通讯作者: Lusis AJ
DOI: 10.1038/nmeth.2722
发表时间: 2013-12
期刊: NATURE METHODS
影响因子: 48
作者:
Engstrom, Par G.;Steijger, Tamara;Sipos, Botond;Grant, Gregory R.;Kahles, Andre;Raetsch, Gunnar;Goldman, Nick;Hubbard, Tim J.;Harrow, Jennifer;Guigo, Roderic;Bertone, Paul
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期刊: SCIENCE
影响因子: 56.9
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