Decoding cell lineage from acquired mutations using arbitrary deep sequencing.

Decoding cell lineage from acquired mutations using arbitrary deep sequencing.
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DOI:
10.1038/nmeth.1781
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发表时间:
2011-11-27
期刊:
影响因子:
48
通讯作者:
Horwitz, Marshall S.
Horwitz, Marshall S.
中科院分区:
生物学1区
文献类型:
--
作者:
Carlson, Cheryl A.;Kas, Arnold;Kirkwood, Robert;Hays, Laura E.;Preston, Bradley D.;Salipante, Stephen J.;Horwitz, Marshall S.

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由于突变是不可避免的,多细胞生物体中每个细胞的基因组变得独特,因此编码了其祖先的记录。在这里,我们将任意单引物PCR与“下一代”DNA测序相结合,以便对培养的小鼠细胞的突变进行分类并解卷积。这项研究有助于为基于体细胞基因组中积累的突变构建回顾性细胞命运图铺平道路。
Because mutations are inevitable, the genome of each cell in a multicellular organism becomes unique and therefore encodes a record of its ancestry. Here we couple arbitrary single primer PCR with “next generation” DNA sequencing in order to catalog mutations and deconvolve the phylogeny of cultured mouse cells. This study helps pave the way toward construction of retrospective cell fate maps based on mutations accumulating in genomes of somatic cells.
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