CcpNmr AnalysisAssign: a flexible platform for integrated NMR analysis.

CcpNmr AnalysisAssign: a flexible platform for integrated NMR analysis.
复制标题

DOI:
10.1007/s10858-016-0060-y
复制
发表时间:
2016-10
影响因子:
2.7
通讯作者:
Vuister GW
Vuister GW
中科院分区:
生物学3区
文献类型:
--
作者:
Skinner SP;Fogh RH;Boucher W;Ragan TJ;Mureddu LG;Vuister GW

文献摘要

参考文献

被引文献

相似文献

NMR光谱是在环境条件下分析生物分子的一种不可或缺的强大技术,用于结构和功能研究。然而,在实践中,该技术的复杂性往往阻碍了非专业人士的应用。在本文中,我们提出了CcpNmr版本-3,最新的软件版本从NMR的协作计算项目,NMR数据分析的各个方面,包括液体和固体NMR数据。该软件设计简单、功能强大且灵活,旨在确保能够以简单的方式执行日常任务。我们根据现代软件工程原理设计了软件,并利用现代图形库的功能简化了各种数据分析任务。我们描述的骨干分配的过程中,作为一个例子的灵活性和简单性的实施工作流程,以及用于创建必要的图形,这个工作流程的工具包。该软件包可以从www.ccpn.ac.uk/v3-software/downloads下载,并免费提供给所有非营利组织。
NMR spectroscopy is an indispensably powerful technique for the analysis of biomolecules under ambient conditions, both for structural- and functional studies. However, in practice the complexity of the technique has often frustrated its application by non-specialists. In this paper, we present CcpNmr version-3, the latest software release from the Collaborative Computational Project for NMR, for all aspects of NMR data analysis, including liquid- and solid-state NMR data. This software has been designed to be simple, functional and flexible, and aims to ensure that routine tasks can be performed in a straightforward manner. We have designed the software according to modern software engineering principles and leveraged the capabilities of modern graphics libraries to simplify a variety of data analysis tasks. We describe the process of backbone assignment as an example of the flexibility and simplicity of implementing workflows, as well as the toolkit used to create the necessary graphics for this workflow. The package can be downloaded from www.ccpn.ac.uk/v3-software/downloads and is freely available to all non-profit organisations.
DOI: 10.1017/s0033583514000122
发表时间: 2015-03
影响因子: 6.1
作者:
Anthis NJ;Clore GM
通讯作者: Clore GM
DOI: 10.1002/prot.20449
发表时间: 2005-06-01
影响因子: 2.9
作者:
Vranken, WF;Boucher, W;Laue, ED
通讯作者: Laue, ED
DOI: 10.1109/mcse.2011.37
发表时间: 2011-03-01
影响因子: 2.1
作者:
van der Walt, Stefan;Colbert, S. Chris;Varoquaux, Gael
通讯作者: Varoquaux, Gael
DOI: 10.1007/bf00417486
发表时间: 1995-07-01
影响因子: 2.7
作者:
BARTELS, C;XIA, TH;WUTHRICH, K
通讯作者: WUTHRICH, K
DOI: 10.1073/pnas.082114199
发表时间: 2002-05-14
影响因子: 11.1
作者:
Grishaev, A;Llinás, M
通讯作者: Llinás, M