EUROCarbDB: An open-access platform for glycoinformatics.

EUROCarbDB: An open-access platform for glycoinformatics.
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DOI:
10.1093/glycob/cwq188
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发表时间:
2011-04
期刊:
影响因子:
4.3
通讯作者:
Haslam SM
Haslam SM
中科院分区:
生物学3区
文献类型:
--
作者:
von der Lieth CW;Freire AA;Blank D;Campbell MP;Ceroni A;Damerell DR;Dell A;Dwek RA;Ernst B;Fogh R;Frank M;Geyer H;Geyer R;Harrison MJ;Henrick K;Herget S;Hull WE;Ionides J;Joshi HJ;Kamerling JP;Leeflang BR;Lütteke T;Lundborg M;Maass K;Merry A;Ranzinger R;Rosen J;Royle L;Rudd PM;Schloissnig S;Stenutz R;Vranken WF;Widmalm G;Haslam SM

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EUROCarbDB项目是一个技术框架的设计研究,它提供了复杂的,免费访问的,开源的信息学工具和数据库,以支持糖生物学和糖组学研究。EUROCarbDB是一个关系型数据库,包含聚糖结构、其生物背景以及来自高效液相色谱、质谱和核磁共振实验的原始和解释分析数据(如可用)。数据库内容可通过基于网络的用户界面访问。该数据库由一套糖信息学工具补充,专门设计用于与当代碳水化合物研究工作流程结合使用时,协助阐明和提交聚糖结构和实验数据。所有软件工具和源代码都是根据宽松通用公共许可证的条款授权的,公开贡献的结构和数据可以自由访问。EUROCarbDB Web界面的公共测试版本可以在。
The EUROCarbDB project is a design study for a technical framework, which provides sophisticated, freely accessible, open-source informatics tools and databases to support glycobiology and glycomic research. EUROCarbDB is a relational database containing glycan structures, their biological context and, when available, primary and interpreted analytical data from high-performance liquid chromatography, mass spectrometry and nuclear magnetic resonance experiments. Database content can be accessed via a web-based user interface. The database is complemented by a suite of glycoinformatics tools, specifically designed to assist the elucidation and submission of glycan structure and experimental data when used in conjunction with contemporary carbohydrate research workflows. All software tools and source code are licensed under the terms of the Lesser General Public License, and publicly contributed structures and data are freely accessible. The public test version of the web interface to the EUROCarbDB can be found at .
DOI: 10.1093/glycob/cwl048
发表时间: 2007-01-01
期刊: GLYCOBIOLOGY
影响因子: 4.3
作者:
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影响因子: 3.1
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