Remediation of the protein data bank archive.

Remediation of the protein data bank archive.
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DOI:
10.1093/nar/gkm937
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发表时间:
2008-01
影响因子:
14.9
通讯作者:
Berman HM
Berman HM
中科院分区:
生物学2区
文献类型:
--
作者:
Henrick K;Feng Z;Bluhm WF;Dimitropoulos D;Doreleijers JF;Dutta S;Flippen-Anderson JL;Ionides J;Kamada C;Krissinel E;Lawson CL;Markley JL;Nakamura H;Newman R;Shimizu Y;Swaminathan J;Velankar S;Ory J;Ulrich EL;Vranken W;Westbrook J;Yamashita R;Yang H;Young J;Yousufuddin M;Berman HM

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全球蛋白质数据库(wwPDB; wwpdb.org)是管理PDB档案的沉积,处理和分发的国际合作。在ftp://ftp.wwpdb.org上的在线PDB档案库是47000多个结构的坐标和相关信息的存储库,包括蛋白质,核酸和大分子复合物,这些结构已经使用X射线晶体学,NMR和电子显微镜技术确定。wwPDB-RCSB PDB(美国)、MSD-EBI(欧洲)、PDBj(日本)和BMRB(美国)的成员已修复此存档,以解决多年来出现的不一致问题。介绍了该项目的范围和方法。
The Worldwide Protein Data Bank (wwPDB; wwpdb.org) is the international collaboration that manages the deposition, processing and distribution of the PDB archive. The online PDB archive at ftp://ftp.wwpdb.org is the repository for the coordinates and related information for more than 47 000 structures, including proteins, nucleic acids and large macromolecular complexes that have been determined using X-ray crystallography, NMR and electron microscopy techniques. The members of the wwPDB–RCSB PDB (USA), MSD-EBI (Europe), PDBj (Japan) and BMRB (USA)–have remediated this archive to address inconsistencies that have been introduced over the years. The scope and methods used in this project are presented.
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