NCBI Reference Sequence (RefSeq): a curated non-redundant sequence database of genomes, transcripts and proteins.

NCBI Reference Sequence (RefSeq): a curated non-redundant sequence database of genomes, transcripts and proteins.
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DOI:
10.1093/nar/gki025
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发表时间:
2005-01-01
影响因子:
14.9
通讯作者:
Maglott DR
Maglott DR
中科院分区:
生物学2区
文献类型:
--
作者:
Pruitt KD;Tatusova T;Maglott DR

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美国国家生物技术信息中心(NCBI)参考序列(RefSeq)数据库(http://www.ncbi.nlm.nih.gov/RefSeq/)提供了一组非冗余的序列集合,这些序列代表了基因组数据、转录本和蛋白质。尽管其目标是提供一个能代表任何给定物种完整序列信息的综合数据集,但该数据库实际上包含了目前在存档数据库中公开可用的序列数据。该数据库整合了来自2400多种生物的数据,包括100多万种蛋白质,这些蛋白质代表了涵盖原核生物、真核生物和病毒的重要分类多样性。核苷酸和蛋白质序列有明确的关联,并且这些序列与其他资源相关联,包括NCBI图谱浏览器和基因。序列经过注释,包含编码区、保守结构域、变异、参考文献、名称、数据库交叉引用以及其他特征,注释采用了合作以及来自科学界的其他输入、自动注释、从GenBank传播以及由NCBI工作人员进行人工审校的综合方法。
The National Center for Biotechnology Information (NCBI) Reference Sequence (RefSeq) database (http://www.ncbi.nlm.nih.gov/RefSeq/) provides a non-redundant collection of sequences representing genomic data, transcripts and proteins. Although the goal is to provide a comprehensive dataset representing the complete sequence information for any given species, the database pragmatically includes sequence data that are currently publicly available in the archival databases. The database incorporates data from over 2400 organisms and includes over one million proteins representing significant taxonomic diversity spanning prokaryotes, eukaryotes and viruses. Nucleotide and protein sequences are explicitly linked, and the sequences are linked to other resources including the NCBI Map Viewer and Gene. Sequences are annotated to include coding regions, conserved domains, variation, references, names, database cross-references, and other features using a combined approach of collaboration and other input from the scientific community, automated annotation, propagation from GenBank and curation by NCBI staff.
DOI: 10.1093/nar/gkh033
发表时间: 2004-01-01
影响因子: 14.9
作者:
Christie, KR;Weng, S;Cherry, JM
通讯作者: Cherry, JM
DOI: 10.1093/nar/gki031
发表时间: 2005-01-01
影响因子: 14.9
作者:
Maglott D;Ostell J;Pruitt KD;Tatusova T
通讯作者: Tatusova T
DOI: 10.1093/bioinformatics/15.7.536
发表时间: 1999-07-01
期刊: BIOINFORMATICS
影响因子: 5.8
作者:
Tatusova, TA;Karsch-Mizrachi, I;Ostell, JA
通讯作者: Ostell, JA
DOI: 10.1093/nar/29.1.308
发表时间: 2001-01-01
影响因子: 14.9
作者:
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通讯作者: Sirotkin, K
DOI: 10.1093/nar/gkg087
发表时间: 2003-01-01
影响因子: 14.9
作者:
Marchler-Bauer, A;Anderson, JB;Bryant, SH
通讯作者: Bryant, SH