Bias in RNA-seq Library Preparation: Current Challenges and Solutions.

Bias in RNA-seq Library Preparation: Current Challenges and Solutions.
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RNA-seq 文库制备中的偏差:当前的挑战和解决方案

DOI:
10.1155/2021/6647597
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发表时间:
2021
影响因子:
--
通讯作者:
Ge Q
Ge Q
中科院分区:
生物学3区
文献类型:
--
作者:
Shi H;Zhou Y;Jia E;Pan M;Bai Y;Ge Q

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尽管RNA测序(RNA-seq)已成为最先进的转录组分析技术,但它也面临着各种挑战。众所周知,RNA-seq的工作流程极其复杂,而且很容易产生偏差。这可能会损害 RNA-seq 数据集的质量并导致对测序结果的错误解释。因此,我们对这些偏差的来源和性质的详细了解对于解释 RNA-seq 数据、找到提高 RNA-seq 实验质量的方法或开发生物信息学工具来补偿这些偏差至关重要。在这里,我们讨论 RNA-seq 中实验偏差的来源。并且针对每种类型的偏差,我们讨论了改进的方法,以期为RNA-seq实验研究人员提供一些有用的建议。
Although RNA sequencing (RNA-seq) has become the most advanced technology for transcriptome analysis, it also confronts various challenges. As we all know, the workflow of RNA-seq is extremely complicated and it is easy to produce bias. This may damage the quality of RNA-seq dataset and lead to an incorrect interpretation for sequencing result. Thus, our detailed understanding of the source and nature of these biases is essential for the interpretation of RNA-seq data, finding methods to improve the quality of RNA-seq experimental, or development bioinformatics tools to compensate for these biases. Here, we discuss the sources of experimental bias in RNA-seq. And for each type of bias, we discussed the method for improvement, in order to provide some useful suggestions for researcher in RNA-seq experimental.
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