Significance of Individual Domains of ClpL: A Novel Chaperone from Streptococcus mutans.

Significance of Individual Domains of ClpL: A Novel Chaperone from Streptococcus mutans.
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DOI:
10.1021/acs.biochem.0c00544
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发表时间:
2020-09-15
期刊:
影响因子:
2.9
通讯作者:
Biswas I
Biswas I
中科院分区:
生物学3区
文献类型:
--
作者:
Jana B;Biswas I

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ClpL是AAA+分子伴侣的HSP 100家族的成员,其广泛存在于革兰氏阳性细菌中,但令人惊讶地不存在于革兰氏阴性细菌中。ClpL参与各种细胞过程,包括胁迫耐受反应、长期存活、毒力和抗生素抗性。ClpL的特征很差,其分子伴侣活性的机制在很大程度上是不清楚的。在这里,我们对来自牙齿病原体变形链球菌的ClpL蛋白进行了生物化学表征,以了解其生物学功能。ClpL具有五个结构域:N-结构域、两个核苷酸结合结构域(NBD-1和NBD-2)、M-结构域和C-结构域。NBD-1和NBD-2分别含有用于ATP结合和水解的不同的步行者A和B基序。我们发现ClpL在溶液中主要以三聚体形式存在;然而,在ATP结合后,它迅速形成六聚体结构。为了研究结构-功能活性,我们构建了几个取代和缺失突变体。我们发现步行者A和B基序的突变干扰ATP水解和寡聚化。类似地,N-、M-和C-结构域的缺失消除了ATP酶活性和寡聚化。由于我们以前发现ClpL作为伴侣,我们分析了伴侣活性。令人惊讶的是,我们发现NBD-2突变体不显示任何伴侣活性,表明ATP结合和NBD-2的伴侣水解的必要性。然而,NBD-1突变体显示分子伴侣活性,但活性是可变的,这取决于突变的性质。我们的研究结果表明,与其他HSP 100家族分子伴侣不同,ClpL是一种新型分子伴侣,其活性不需要任何额外的二级分子伴侣。
ClpL is a member of the HSP100 family of the AAA+ chaperone that is widely present in Gram-positive but surprisingly absent in Gram-negative bacteria. ClpL is involved in various cellular processes including stress tolerance response, long-term survival, virulence, and antibiotic resistance. ClpL is poorly characterized and its molecular mechanisms of chaperone activity are largely unclear. Here, we biochemically characterized the ClpL protein from Streptococcus mutans, a dental pathogen, to understand its biological functions. ClpL harbors five domains: N-domain, two nucleotide binding domains (NBD-1 and NBD-2), M-domain, and C-domain. NBD-1 and NBD-2 contain distinct Walker A and B motifs for ATP binding and hydrolysis, respectively. We found that ClpL predominantly exists as a trimer in solution; however, upon ATP binding, it rapidly forms a hexameric structure. To study structure-function activity, we constructed several substitution and deletion mutants. We found that mutations in Walker A and B motifs interfered with the ATP hydrolysis and oligomerization. Similarly, deletions of N-, M-, and C-domains abolished both the ATPase activity and oligomerization. Since we previously found that ClpL acts as a chaperone, we analyzed the chaperone activity. Surprisingly, we found that the NBD-2 mutants did not display any chaperone activity indicating the essentiality of ATP binding and hydrolysis by NBD-2 for chaperone. However, NBD-1 mutants showed chaperone activities, but the activities were variable depending on the nature of the mutations. Our results indicate that unlike other HSP100 family chaperones, ClpL is a novel chaperone that does not require any additional secondary chaperones for its activity.
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