Perspective: Path Sampling Methods Applied to Enzymatic Catalysis.

Perspective: Path Sampling Methods Applied to Enzymatic Catalysis.
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展望:路径抽样方法在酶催化中的应用。

DOI:
10.1021/acs.jctc.2c00734
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发表时间:
2022-11-08
影响因子:
5.5
通讯作者:
Schwartz, Steven D.
Schwartz, Steven D.
中科院分区:
化学1区
文献类型:
--
作者:
Schwartz, Steven D.

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本视角回顾了使用转换路径采样方法来研究酶催化化学反应。该方法由我们小组在 15 年前首次应用于酶促反应,揭示了酶催化的基本原理,例如蛋白质促进振动,并且还有助于协调静电预组织等思想与酶功能的动态观点。它现在被用来帮助揭示人工酶制造所需的蛋白质设计原理。
This Perspective reviews the use of Transition Path Sampling methods to study enzymatically catalyzed chemical reactions. First applied by our group to an enzymatic reaction over 15 years ago, the method has uncovered basic principles in enzymatic catalysis such as the protein promoting vibration, and it has also helped harmonize such ideas as electrostatic preorganization with dynamic views of enzyme function. It is now being used to help uncover principles of protein design necessary to artificial enzyme creation.
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