The UCSC Genome Browser database: extensions and updates 2011.
The UCSC Genome Browser database: extensions and updates 2011.
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DOI：
10.1093/nar/gkr1055
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发表时间：
2012-01
影响因子：
14.9
通讯作者：
James Kent W
中科院分区：
文献类型：
--
作者：
Dreszer TR;Karolchik D;Zweig AS;Hinrichs AS;Raney BJ;Kuhn RM;Meyer LR;Wong M;Sloan CA;Rosenbloom KR;Roe G;Rhead B;Pohl A;Malladi VS;Li CH;Learned K;Kirkup V;Hsu F;Harte RA;Guruvadoo L;Goldman M;Giardine BM;Fujita PA;Diekhans M;Cline MS;Clawson H;Barber GP;Haussler D;James Kent W
加利福尼亚大学圣克鲁斯大学基因组浏览器（http://genome.ucsc.edu）在线公众访问了不断增长的基因组序列数据库和各种生物体的注释。 ，分析和共享公共可用的基因组数据集。已添加，由贡献者更新，或者重新设计为最新的人类参考基因组。我们引入了“轨道数据集线器”，该曲目允许基因组浏览器访问远程注释集，旨在显着扩展注释轨道的数量和多样性，这些轨道可公开可视化和分析。 。
The University of California Santa Cruz Genome Browser (http://genome.ucsc.edu) offers online public access to a growing database of genomic sequence and annotations for a wide variety of organisms. The Browser is an integrated tool set for visualizing, comparing, analyzing and sharing both publicly available and user-generated genomic data sets. In the past year, the local database has been updated with four new species assemblies, and we anticipate another four will be released by the end of 2011. Further, a large number of annotation tracks have been either added, updated by contributors, or remapped to the latest human reference genome. Among these are new phenotype and disease annotations, UCSC genes, and a major dbSNP update, which required new visualization methods. Growing beyond the local database, this year we have introduced ‘track data hubs’, which allow the Genome Browser to provide access to remotely located sets of annotations. This feature is designed to significantly extend the number and variety of annotation tracks that are publicly available for visualization and analysis from within our site. We have also introduced several usability features including track search and a context-sensitive menu of options available with a right-click anywhere on the Browser's image.
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