Comparison of whole genome assemblies of the human genome.

Comparison of whole genome assemblies of the human genome.
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人类基因组的全基因组组装的比较。

DOI:
10.1093/nar/gkf633
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发表时间:
2002
影响因子:
14.9
通讯作者:
States,DavidJ
States,DavidJ
中科院分区:
生物学2区
文献类型:
--
作者:
Rouchka,EricC;Gish,Warren;States,DavidJ

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A fundamental problem in the human genome project is uncovering the correct assembly of the human genome. Many studies, including transcriptional analysis, SNP detection and characterization, gene finding and EST clustering, use genome assemblies as templates so it is important to determine the consistency among the various whole genome assemblies. A comparison of the order and orientation of the GenBank entries used to construct the NCBI and UCSC Goldenpath assemblies was made. In addition, a sequence level comparison was performed using MULTI, an efficient database search tool developed to make whole genome comparisons possible. The resulting comparisons show significant discrepancies in the sequence as well as in the order and orientation of GenBank entries used in constructing the NCBI and UCSC assemblies.
对与躁郁症和精神分裂症相关的人类染色体 13q32-q33 上大约 15 Mb 区域的组装进行评估。
DOI: 10.1006/geno.2002.6765
发表时间: 2002
期刊: Genomics
影响因子: 4.4
作者:
S. Christian;J. McDonough;Chun;S. Shaikh;V. Vlamakis;J. Badner;A. Chakravarti;E. Gershon
通讯作者: E. Gershon
使用基因组比对的 EST 序列进行 UTR 重建和分析。
DOI: --
发表时间: 2000
期刊: Proceedings. International Conference on Intelligent Systems for Molecular Biology
影响因子: --
作者:
Kan,Z;Gish,W;Rouchka,E;Glasscock,J;States,D
通讯作者: States,D
DOI: 10.1126/science.290.5494.1151
发表时间: 2000-11-10
期刊: SCIENCE
影响因子: 56.9
作者:
Lynch, M;Conery, JS
通讯作者: Conery, JS
基于单核苷酸多态性分布的血统基因组分割的身份。
DOI: --
发表时间: 1999
期刊: Proceedings. International Conference on Intelligent Systems for Molecular Biology
影响因子: --
作者:
Blackwell,TW;Rouchka,E;States,DJ
通讯作者: States,DJ
DOI: 10.1016/s0022-2836(05)80360-2
发表时间: 1990-10-05
影响因子: 5.6
作者:
ALTSCHUL, SF;GISH, W;LIPMAN, DJ
通讯作者: LIPMAN, DJ