MetaboLights: open data repository for metabolomics.
MetaboLights: open data repository for metabolomics.
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MetaboLights：代谢组学的开放数据库。
DOI：
10.1093/nar/gkad1045
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发表时间：
2024-01-05
影响因子：
14.9
通讯作者：
O'Donovan, Claire
中科院分区：
文献类型：
--
作者：
Yurekten, Ozgur;Payne, Thomas;Tejera, Noemi;Amaladoss, Felix Xavier;Martin, Callum;Williams, Mark;O'Donovan, Claire
MetaboLights是代谢组学研究的全球数据库，包括原始实验数据和相关元数据。该数据库是跨物种和跨技术的，涵盖代谢物结构及其参考光谱以及其生物学作用和位置（如可用）。MetaboLights是许多领先期刊和欧洲生命科学信息基础设施ELIXIR推荐的代谢组学存储库。在这篇文章中，我们描述了提交的持续增长和多样性以及近年来的重大发展。特别是，我们强调了MetaboLights Labs，我们新的Galaxy Project实例，具有存储库规模的标准化工作流程，以及MetaboLights上的公共数据如何被社区重用。代谢组学资源和数据可根据EMBL-EBI的使用条款在https://www.ebi.ac.uk/metabolights和Apache 2.0在https://github.com/EBI-Metabolights获得。
MetaboLights is a global database for metabolomics studies including the raw experimental data and the associated metadata. The database is cross-species and cross-technique and covers metabolite structures and their reference spectra as well as their biological roles and locations where available. MetaboLights is the recommended metabolomics repository for a number of leading journals and ELIXIR, the European infrastructure for life science information. In this article, we describe the continued growth and diversity of submissions and the significant developments in recent years. In particular, we highlight MetaboLights Labs, our new Galaxy Project instance with repository-scale standardized workflows, and how data public on MetaboLights are being reused by the community. Metabolomics resources and data are available under the EMBL-EBI’s Terms of Use at https://www.ebi.ac.uk/metabolights and under Apache 2.0 at https://github.com/EBI-Metabolights.
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影响因子：
14.9
作者：
Haug K;Salek RM;Conesa P;Hastings J;de Matos P;Rijnbeek M;Mahendraker T;Williams M;Neumann S;Rocca-Serra P;Maguire E;González-Beltrán A;Sansone SA;Griffin JL;Steinbeck C
通讯作者：
Steinbeck C
影响因子：
16.6
作者：
Alka O;Shanthamoorthy P;Witting M;Kleigrewe K;Kohlbacher O;Röst HL
通讯作者：
Röst HL
影响因子：
14.9
作者：
Richardson, Lorna;Allen, Ben;Baldi, Germana;Beracochea, Martin;Bileschi, Maxwell L.;Burdett, Tony;Burgin, Josephine;Caballero-Perez, Juan;Cochrane, Guy;Colwell, Lucy J.;Curtis, Tom;Escobar-Zepeda, Alejandra;Gurbich, Tatiana A.;Kale, Varsha;Korobeynikov, Anton;Raj, Shriya;Rogers, Alexander B.;Sakharova, Ekaterina;Sanchez, Santiago;Wilkinson, Darren J.;Finn, Robert D.
通讯作者：
Finn, Robert D.
影响因子：
14.9
作者：
Burgin, Josephine;Ahamed, Alisha;Cummins, Carla;Devraj, Rajkumar;Gueye, Khadim;Gupta, Dipayan;Gupta, Vikas;Haseeb, Muhammad;Ihsan, Maira;Ivanov, Eugene;Jayathilaka, Suran;Kadhirvelu, Vishnukumar Balavenkataraman;Kumar, Manish;Lathi, Ankur;Leinonen, Rasko;Mansurova, Milena;McKinnon, Jasmine;O'Cathail, Colman;Pauperio, Joana;Pesant, Stephane;Rahman, Nadim;Rinck, Gabriele;Selvakumar, Sandeep;Suman, Swati;Vijayaraja, Senthilnathan;Waheed, Zahra;Woollard, Peter;Yuan, David;Zyoud, Ahmad;Burdett, Tony;Cochrane, Guy
通讯作者：
Cochrane, Guy
影响因子：
14.9
作者：
Courtot M;Gupta D;Liyanage I;Xu F;Burdett T
通讯作者：
Burdett T