The complete mitochondrial genome of the peppermint shrimp Lysmata wurdemanni (Decapoda: Lysmatidae).

The complete mitochondrial genome of the peppermint shrimp Lysmata wurdemanni (Decapoda: Lysmatidae).
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DOI:
10.1080/23802359.2021.1937364
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发表时间:
2021-06-15
期刊:
Mitochondrial DNA. Part B, Resources
影响因子:
--
通讯作者:
Janosik AM
Janosik AM
中科院分区:
其他
文献类型:
--
作者:
Epps MT;Nguyen RT;Samborski KL;Bogantes VE;Janosik AM

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本研究从美国Apalachee Bay采集的一个标本中获得了一个完整的16,979 bp的Lysmatawurdemanni(Gibbes,1850)线粒体基因组,该基因组包含37个基因,其中A、T、C和G的含量分别为32.33%、35.01%、19.55%和13.10%,G + C的总含量为32.65%。基于线粒体蛋白编码基因的最大似然系统发育树表明L。根据可获得的近缘种线粒体序列,wurdemanni与Lysmata vittata和Lysmata amboinensis聚类。这些数据有助于确定Lysmatidae和Thoridae之间的系统发育关系。线粒体基因组测序也可能有助于了解两性物种的进化差异和育种策略。
In this study, the complete 16,979 bp mitochondrial genome of Lysmata wurdemanni (Gibbes, 1850) was determined from a specimen collected from Apalachee Bay, U.S. The mitogenome contains 37 genes, and consists of 32.33% A, 35.01% T, 19.55% C, and 13.10% G, with a total G + C content of 32.65%. A maximum likelihood phylogenetic tree based on mitochondrial protein-coding genes suggested L. wurdemanni is clustered with Lysmata vittata and Lysmata amboinensis, based on available mitochondrial sequences of relatives. These data are useful in determining phylogenetic relationships between Lysmatidae and Thoridae. The sequenced mitochondrial genome may also assist in understanding evolutionary distinctions and breeding strategies in hermaphroditic species.
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期刊: PeerJ
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