SGER: Extremely Large Insert Clone Libraries for Functional Characterization of Uncultured Archaea

SGER：用于未培养古细菌功能表征的超大插入克隆文库

• 批准号: 0001619
• 负责人: Edward DeLong
• 金额: $ 8.43万
• 依托单位: University of California-Santa Cruz
• 依托单位国家: 美国
• 项目类别: Standard Grant
• 财政年份: 2000
• 资助国家: 美国
• 起止时间: 2000-05-15 至 2002-04-30
• 项目状态: 已结题
• 来源: https://www.nsf.gov/awardsearch/showAward?AWD_ID=0001619&HistoricalAwards=false
• 关键词: SGER; Extremely; Large; Insert; Clone

This project is intended to push technologies derived from the human genome project to their current limits, to characterize the genomes of uncultivated marine archaea. These archaea represent 15% or more of all prokaryotic cells in the worlds oceans, yet their biochemistry, physiology, and ecological significance is unknown. The approach involves isolation of extremely large (150-300 kb) genomic fragments from uncultivated planktonic archaea in Bacterial Artificial Chromosome (BAC) clone libraries. A BAC clone library with such extremely large inserts has never before been reported from a mixed natural microbial population. By pushing the current limits of genomic technologies and applying them in mixed populations, the investigators aim to improve the current knowledge of enigmatic but important uncultivated microbes, specifically marine planktonic archaea. The work will also provide improved generic methodologies for the genomic and functional characterization of uncultivated microorganisms and determination of their functional properties.

该项目旨在将人类基因组计划中的技术推向目前的极限，以确定未开垦海洋古菌的基因组特征。 这些古生菌占世界海洋中所有原核细胞的15%或更多，但它们的生物化学，生理学和生态学意义尚不清楚。 该方法涉及从细菌人工染色体（BAC）克隆文库中的未培养的嗜热古菌中分离出极大（150-300 kb）的基因组片段。 具有如此大插入片段的BAC克隆文库以前从未报道过来自混合天然微生物群体。 通过推动基因组技术的现有限制并将其应用于混合种群，研究人员的目标是提高目前对神秘但重要的未培养微生物，特别是海洋嗜热古菌的认识。 这项工作还将为未培养微生物的基因组和功能特性以及确定其功能特性提供改进的通用方法。